PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022723847.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YA
Protein Properties Length: 348aa    MW: 38099.5 Da    PI: 8.8606
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022723847.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA96.72.5e-30186242158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     dep+YVNaKQyq+Il+RRq R kl++++kl +k r+pylheSRh hAl+R+Rg+gGrF
  XP_022723847.1 186 DEPIYVNAKQYQAILRRRQYRSKLDAQNKL-IKVRRPYLHESRHIHALKRARGNGGRF 242
                     79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MQNLHRKDSA VSSHSMCTYV VQCSSWGNST ESYVQQSSMS ESLSLKMGVL PQHFHNTKQL  60
SFQFQDQDSS STQSTGQSYP EVASAGESNV YGKSLISASS GGNETHGKHV GGHAKLASSI  120
GTQEYVFPSS QVDYRKSIAH FPLHYSETLS GGVLAAAYGP QAMIDHPHMM AMVPARVPLP  180
LQLTEDEPIY VNAKQYQAIL RRRQYRSKLD AQNKLIKVRR PYLHESRHIH ALKRARGNGG  240
RFLNTKKVQE SKCIPTSNGL DMSRSPQLHL SANISKSEVH QLQNYKDAAS ATSCSDVTTA  300
SNSDEMFQQP DLRFSGYPFN FSGGMPGHTD DIHGGGGGGN LHHLSGLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.13e-77NF-YA family protein