PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022723846.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | NF-YA | ||||||||
Protein Properties | Length: 349aa MW: 38227.6 Da PI: 8.8606 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 96.7 | 2.5e-30 | 187 | 243 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 dep+YVNaKQyq+Il+RRq R kl++++kl +k r+pylheSRh hAl+R+Rg+gGrF XP_022723846.1 187 DEPIYVNAKQYQAILRRRQYRSKLDAQNKL-IKVRRPYLHESRHIHALKRARGNGGRF 243 79****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence |
MQNLHRKDSA VSSHSMCTYV VQCSSWGNST ESYVQQSSMS ESLSLKMGVL PQHFHNTKQL 60 SFQFQDQDSS STQSTGQSYP EVASAGESNV YGKSLISASS GGNETHGKHV GGHAKLASSI 120 GTQEYVFPSS QVDYRKSIAH FPLHYSETLS GGVLAAAYGP QAMQIDHPHM MAMVPARVPL 180 PLQLTEDEPI YVNAKQYQAI LRRRQYRSKL DAQNKLIKVR RPYLHESRHI HALKRARGNG 240 GRFLNTKKVQ ESKCIPTSNG LDMSRSPQLH LSANISKSEV HQLQNYKDAA SATSCSDVTT 300 ASNSDEMFQQ PDLRFSGYPF NFSGGMPGHT DDIHGGGGGG NLHHLSGLC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72830.1 | 5e-76 | NF-YA family protein |