PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022723846.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YA
Protein Properties Length: 349aa    MW: 38227.6 Da    PI: 8.8606
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022723846.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA96.72.5e-30187243158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     dep+YVNaKQyq+Il+RRq R kl++++kl +k r+pylheSRh hAl+R+Rg+gGrF
  XP_022723846.1 187 DEPIYVNAKQYQAILRRRQYRSKLDAQNKL-IKVRRPYLHESRHIHALKRARGNGGRF 243
                     79****************************.**************************9 PP

Sequence ? help Back to Top
Protein Sequence    Length: 349 aa     Download sequence    
MQNLHRKDSA VSSHSMCTYV VQCSSWGNST ESYVQQSSMS ESLSLKMGVL PQHFHNTKQL  60
SFQFQDQDSS STQSTGQSYP EVASAGESNV YGKSLISASS GGNETHGKHV GGHAKLASSI  120
GTQEYVFPSS QVDYRKSIAH FPLHYSETLS GGVLAAAYGP QAMQIDHPHM MAMVPARVPL  180
PLQLTEDEPI YVNAKQYQAI LRRRQYRSKL DAQNKLIKVR RPYLHESRHI HALKRARGNG  240
GRFLNTKKVQ ESKCIPTSNG LDMSRSPQLH LSANISKSEV HQLQNYKDAA SATSCSDVTT  300
ASNSDEMFQQ PDLRFSGYPF NFSGGMPGHT DDIHGGGGGG NLHHLSGLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.15e-76NF-YA family protein