PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022723533.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Protein Properties

Length: 853aa MW: 93573.1 Da PI: 8.0259

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022723533.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.6	1.1e-18	308	407	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+k l+ sd+++ grlvlpkk+ae++ ++++e+ l+++d++g++W +++++ +++s++yvl+ G + +L++gD+v+F++ + +++ XP_022723533.1 308 FEKMLSASDAGRIGRLVLPKKCAEAYfpAISQPEGLPLKVQDSKGKEWIFQFRFwpNNNSRMYVLE-GVTPCIQNMQLQAGDVVTFSRLE-PGGK 400 89************************666667778***********99899999999.*******************665.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_022723533.1 401 LVMGFRK 407 7777776 PP

Sequence ? help Back to Top
Protein Sequence Length: 853 aa Download sequence
MTSTSGAASS SKICFNSDCN DLKSERPRKG WRLRTGELAE LCDRCACAFE EGRFCDTFHS 60 KASGWRNCES CGKAPNSSWP PLLFHSSLSE RFKDYSAKGW SQLAGSGPVP WRQAPSLFNS 120 SIPQPELHSR VPYEVDLSTG IDRLNVSDRL SIPSLEKTKI EDFSERLMNG PLKLGAPDIL 180 ENGNAGINCE EPPSSCLTKS QQPSLKEEPS NPPFGLAVPY TSPGDANGQI GVSGTHLRPN 240 PQPPLAKQLH SNLHNGLDSS SETQIRNGRP RPDGRGRNQL FPRYWPRFTN QDLQQISGDS 300 NSIITPLFEK MLSASDAGRI GRLVLPKKCA EAYFPAISQP EGLPLKVQDS KGKEWIFQFR 360 FWPNNNSRMY VLEGVTPCIQ NMQLQAGDVV TFSRLEPGGK LVMGFRKAST ASATEQDNEA 420 KNSSGVSMHG DAEMADPTSW SKVDKSGYIA KEALGTKLAA SRKRKNSMLG SKSKRLRIDT 480 KDLIELKLTW EEAQGLLRPP PNHVPSVVVI EGFEFEEYED APILGKPTIF ATDNSGEKIQ 540 WAQCEDCFKW RRLPSNALLP SKWICSSNSW DPERSFCLAP QELTTEQLED LLPHCNPAAS 600 KKMKAAKREP ENVDALEGLD TLANLAILGE GEALPASSQA TTKHPRHRPG CSCIVCIQPP 660 SGKGPKHKQT CTCNVCQTVK RRFRTLMLRR EKKQSQKEAE TTCKKPQPSL PDKVLDDDPV 720 PRTNAGNSSP NVKKVVSEGS DNDPNRVKSS TSPFKGQIDL NIQPEREEEL SPGADSGSMM 780 RLIQDATERY LRQQMLSSGG NSNSDATQTP PGGGSEGEKI SSSVNLGSSH RDSDRDHPTV 840 FSIKTSAPSS ATG

Sequence ? help Back to Top

Protein Sequence Length: 853 aa Download sequence

MTSTSGAASS SKICFNSDCN DLKSERPRKG WRLRTGELAE LCDRCACAFE EGRFCDTFHS  60
KASGWRNCES CGKAPNSSWP PLLFHSSLSE RFKDYSAKGW SQLAGSGPVP WRQAPSLFNS  120
SIPQPELHSR VPYEVDLSTG IDRLNVSDRL SIPSLEKTKI EDFSERLMNG PLKLGAPDIL  180
ENGNAGINCE EPPSSCLTKS QQPSLKEEPS NPPFGLAVPY TSPGDANGQI GVSGTHLRPN  240
PQPPLAKQLH SNLHNGLDSS SETQIRNGRP RPDGRGRNQL FPRYWPRFTN QDLQQISGDS  300
NSIITPLFEK MLSASDAGRI GRLVLPKKCA EAYFPAISQP EGLPLKVQDS KGKEWIFQFR  360
FWPNNNSRMY VLEGVTPCIQ NMQLQAGDVV TFSRLEPGGK LVMGFRKAST ASATEQDNEA  420
KNSSGVSMHG DAEMADPTSW SKVDKSGYIA KEALGTKLAA SRKRKNSMLG SKSKRLRIDT  480
KDLIELKLTW EEAQGLLRPP PNHVPSVVVI EGFEFEEYED APILGKPTIF ATDNSGEKIQ  540
WAQCEDCFKW RRLPSNALLP SKWICSSNSW DPERSFCLAP QELTTEQLED LLPHCNPAAS  600
KKMKAAKREP ENVDALEGLD TLANLAILGE GEALPASSQA TTKHPRHRPG CSCIVCIQPP  660
SGKGPKHKQT CTCNVCQTVK RRFRTLMLRR EKKQSQKEAE TTCKKPQPSL PDKVLDDDPV  720
PRTNAGNSSP NVKKVVSEGS DNDPNRVKSS TSPFKGQIDL NIQPEREEEL SPGADSGSMM  780
RLIQDATERY LRQQMLSSGG NSNSDATQTP PGGGSEGEKI SSSVNLGSSH RDSDRDHPTV  840
FSIKTSAPSS ATG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30470.1	1e-156	B3 family protein