PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022723078.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | FAR1 | ||||||||
Protein Properties | Length: 207aa MW: 24061 Da PI: 6.178 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 61.5 | 2.5e-19 | 46 | 129 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY++YA++vGF +r+ +s+ks+r+g +r + C + ++++ + +++ ++r +C a+++++++k g w+++k++ +HnH+l+ XP_022723078.1 46 FYDDYARQVGFFTRVLSSHKSERDGLLFSRGLGCRGYPGDQTKV-----QLQKQDKQRENCSAMIHLRRDKAGGWVIKKFVRDHNHPLV 129 9*********************************7655444444.....45889999******************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 207 aa Download sequence |
MDEQVDDVDG RLEASTGDES NMHDNETIRE PYVGMIFESE EDAKTFYDDY ARQVGFFTRV 60 LSSHKSERDG LLFSRGLGCR GYPGDQTKVQ LQKQDKQREN CSAMIHLRRD KAGGWVIKKF 120 VRDHNHPLVI QLDENGRTLD EEKDKKIQEL TAELRVKKRL SASYREQLVA FMKEVEDHNF 180 NISMKVQRTL DNLKKLDAEA KELLHGR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 8e-54 | FAR1 family protein |