PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022722961.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 227aa MW: 24537.6 Da PI: 10.23 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.4 | 0.00048 | 75 | 97 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C+ C++ F+++ L H++ H XP_022722961.1 75 FECQFCHRGFPNSQALGGHQNAH 97 89******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence |
MIPLYISMDL LKINTSASSP FLLLISMSAP ENNGADEPGP GRKQSSTLKL FGFPVAAAYD 60 KEPVIVPGSA DYKRFECQFC HRGFPNSQAL GGHQNAHKRE RRAKQASSFN VHHHQQQQRF 120 MTTGPLITAH SARSKRLIYA RGSTSVTTTD AVRLRGVSAP SLPMLPLRGP CPSRVGGGSQ 180 QGNGPFQVQT HEVGLGSTSD SSVATQVNEE DNIDLHLRLA TSTTTSR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06650.1 | 9e-16 | C2H2 family protein |