PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022722778.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | FAR1 | ||||||||
Protein Properties | Length: 229aa MW: 26324.4 Da PI: 9.3045 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 84.3 | 1.9e-26 | 64 | 152 | 2 | 90 |
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY+eYA++vGF +r+ + ++s+r+g+i r++ C+keg+ + + k r++r+++r gCka++++k +k+gkw++t+++++HnH+l+ XP_022722778.1 64 FYDEYARRVGFVMRVMSCRRSERDGRILARRLGCNKEGHCVSIRGKFGPVRKPRPSSREGCKAMIHIKVNKSGKWVITRFVKDHNHPLV 152 9**************************************99999998****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 229 aa Download sequence |
MSDDKRCEFS VRRAFILMVD LDEGAVAIES FRGGEIVAVP CEGDPIVEPH EGVEFESEDA 60 AKIFYDEYAR RVGFVMRVMS CRRSERDGRI LARRLGCNKE GHCVSIRGKF GPVRKPRPSS 120 REGCKAMIHI KVNKSGKWVI TRFVKDHNHP LVVAPREARQ TMDEKDKRIQ VLTAELRNKK 180 RLCAAYQEQL TAFMKVVEEH GNQLSKKVQN VVNNLKEYES IELQLLQHR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G43280.1 | 1e-111 | FAR1 family protein |