PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022722720.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Protein Properties

Length: 802aa MW: 88960.8 Da PI: 6.4661

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022722720.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	58.2	1.5e-18	202	301	1	98
EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 f+kvl+ sd+++ grlvlpk +ae++ + ++e+ l+++d +g++W +++++ +++s++yvl+ G ++ +L++gD+v+F++++ e++ XP_022722720.1 202 FEKVLSASDAGRIGRLVLPKACAEAYfpPITQPEGLPLRIQDVKGKEWVFQFRFwpNNNSRMYVLE-GVTPCIQSMQLQAGDTVTFSRMD-PEGK 294 99************************555667778***********99899999999.*******************876.7777 PP .EEEEE- CS B3 92 lvvkvfr 98 lv+++++ XP_022722720.1 295 LVMGFRK 301 7877776 PP

Sequence ? help Back to Top
Protein Sequence Length: 802 aa Download sequence
MASKSCMNGL CGASTSIEWR KGWILRSGDF ANLCDKCGTA YEQAIFCDVF HSKDSGWREC 60 TSCGKHLHCG CIASMCLLEL LDSGGVNCTS CAKKSGFNSM IEDENPNGFG IVNSDTGQLH 120 SISADNQLSS VSKSRHLLPK PPKPVLATGW EVNTGMVPQI RVARPPEGRG RNQLLPRYWP 180 RITDQELQQI SGVSNSTIVP LFEKVLSASD AGRIGRLVLP KACAEAYFPP ITQPEGLPLR 240 IQDVKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRMD PEGKLVMGFR 300 KATNTASVQE TLPSAIPNGT LSSESFFSGV FDNLPIISGY SGLVQSLKGS TNPHLTALSK 360 HLSSAGGGIS WHKSDNHGDR TREGFLLPSM LAPERKRTRN IGSKSKRLLV DSQDALELKL 420 TWEEAQDLLR PPPSIKPSVV KIEDHDFEEY DEPPVFGQRN IYAVRSTGEQ EQWAQCDSCS 480 KWRRLPVDDL LPPKWTCADN NWDQSRSSCS APDELTQREL ENLLRLNKDF KKRRILAFHR 540 ASQEHESSGL DALANAAILG DNADHSGTMS VATTTKHPRH RAGCSCIVCI QPPSGKGKHK 600 PTCTCKLCMT VKRRFKTLMM RKKKRQSERE AEIVQRNQQA WGPREEAELD SSSKLISSQL 660 DPSENEARSV NELEYSNSQI NNLPHKLVEA NKGGIDLNCD PDREDDSQFG SNRASMMSLL 720 QVASLPLETY LKENGLTSLE SEQQANSVSH APPRTIKGEA QDNSCFPSAT EEHESRDEEN 780 GETGSDRVEN ENENENENEN YA

Sequence ? help Back to Top

Protein Sequence Length: 802 aa Download sequence

MASKSCMNGL CGASTSIEWR KGWILRSGDF ANLCDKCGTA YEQAIFCDVF HSKDSGWREC  60
TSCGKHLHCG CIASMCLLEL LDSGGVNCTS CAKKSGFNSM IEDENPNGFG IVNSDTGQLH  120
SISADNQLSS VSKSRHLLPK PPKPVLATGW EVNTGMVPQI RVARPPEGRG RNQLLPRYWP  180
RITDQELQQI SGVSNSTIVP LFEKVLSASD AGRIGRLVLP KACAEAYFPP ITQPEGLPLR  240
IQDVKGKEWV FQFRFWPNNN SRMYVLEGVT PCIQSMQLQA GDTVTFSRMD PEGKLVMGFR  300
KATNTASVQE TLPSAIPNGT LSSESFFSGV FDNLPIISGY SGLVQSLKGS TNPHLTALSK  360
HLSSAGGGIS WHKSDNHGDR TREGFLLPSM LAPERKRTRN IGSKSKRLLV DSQDALELKL  420
TWEEAQDLLR PPPSIKPSVV KIEDHDFEEY DEPPVFGQRN IYAVRSTGEQ EQWAQCDSCS  480
KWRRLPVDDL LPPKWTCADN NWDQSRSSCS APDELTQREL ENLLRLNKDF KKRRILAFHR  540
ASQEHESSGL DALANAAILG DNADHSGTMS VATTTKHPRH RAGCSCIVCI QPPSGKGKHK  600
PTCTCKLCMT VKRRFKTLMM RKKKRQSERE AEIVQRNQQA WGPREEAELD SSSKLISSQL  660
DPSENEARSV NELEYSNSQI NNLPHKLVEA NKGGIDLNCD PDREDDSQFG SNRASMMSLL  720
QVASLPLETY LKENGLTSLE SEQQANSVSH APPRTIKGEA QDNSCFPSAT EEHESRDEEN  780
GETGSDRVEN ENENENENEN YA

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	612	623	KRRFKTLMMRKK
2	612	625	KRRFKTLMMRKKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32010.1	0.0	B3 family protein