PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022722605.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 314aa    MW: 35395 Da    PI: 6.4352
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022722605.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH23.11.2e-07198223126
                     --S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaHg 26 
                     y   +C+++ +tG+  yG++CkF+H+
  XP_022722605.1 198 YQPDICKDYKETGYRGYGESCKFMHD 223
                     67789********************6 PP

Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MTDSSEPQYP GKRTQQFETE PQQSEQVCNF FRKPTKGKNI RKRTTNGDED SRNGTSLLHN  60
QKKDLKPDNM LCFSTGSSGS AAPTESNTES DKLIFQFKSL KEIQVQNDSR ATATLETETE  120
FTKDARAIHE KVLKRAEESF KGKNTSSGEE KLYKGMHGYV DHKAGFQREQ TGASEKAGGS  180
HRPIRASAHI SVSARFDYQP DICKDYKETG YRGYGESCKF MHDSGYYKSG WLLEKDLEEA  240
QKARKRNLAL GGDDDDDEAG VDQSDDDDDD SLPFACFICL QPFVDPVVTT CNHYFCEHCA  300
LKHHAKNKKC FVCN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01350.11e-128C3H family protein