PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022721905.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

SBP

Protein Properties

Length: 895aa MW: 99444 Da PI: 8.06

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022721905.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	128.9	2e-40	22	99	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cqve+C++dls+ak+yhrrh+vC++hska+++lv +++qrfCqqCsrfh l+efD++krsCrrrLa+hn+rrrk+++ XP_022721905.1 22 VCQVEDCRTDLSNAKDYHRRHRVCDMHSKASKALVGNVMQRFCQQCSRFHVLQEFDDGKRSCRRRLAGHNRRRRKTNP 99 6**************************************************************************976 PP

Sequence ? help Back to Top
Protein Sequence Length: 895 aa Download sequence
MNDEAKCGKK PKVTGTTSSH AVCQVEDCRT DLSNAKDYHR RHRVCDMHSK ASKALVGNVM 60 QRFCQQCSRF HVLQEFDDGK RSCRRRLAGH NRRRRKTNPD NERSSSYLLI SLLRILSNMH 120 SNNSDQTKDQ DLLSQLLRSL ASLTGSTIGR NISGLPQGSQ GVVNAGASLG NLEKVTDVVS 180 NGTERATPSG SASKIDGCAN VPDRQGPMGH CGTLPASDLA QKRANDDVQD GSLSDSPSKI 240 LIPSGASFPF RANEPEATVG RIRMNNIDLN NVYNDSQDYV DNLERALVLK NPVNGSLHSS 300 VCLSESHKSS PHQQSGNSDS TSGQSPCTSS GEAQSCTNRI VFKLFGKDPN NFPIALRRQI 360 LDWLSHSPTD IESYIRPGCI ILTIYLRLGE SAWEELFCDL GSSLRRLVDM SNDSFWKTGW 420 VYARVQHSVA FIYNGRVLLD TTLPLKSDKN CRISSIKPIA VSVTEGAQFL VKGFNLNQSG 480 TRLLCAIEGK YLVQESCCNL MEVVDPVNEH DELQYLSFHC SIPNVSGRGF IEVEGHGLSS 540 TFFPFIVAEQ EVCSEICTLE GVIETAVPTV DINKDVEKME TKNQALDFIH EMGWLLHRNH 600 LSWRLGHLNP NSYLFPFRRF KWLMEFSMDH DWCAVVKKLL GILFDGTIDL RDHSSIEFAL 660 LDMCLLHRAV QRNCRPMVEL LLRYVPDKVL DKSGSEKPKV DGNNYGFMFK PNVAGPAGLT 720 PLHVAASRGG SENVLDALTE DPGSAAIEAW RSARDSTGLT PNDYACLRGH YSYIHLVQRK 780 INKKSECGHV VLDIPRTMLD SNSKQKLSDG TRLEKAASLE TENIKMKTRR QCCKACEQKL 840 ANRNSRTSPV YRPAMLSMVA IAAVCVCMAL LFKSSPEVLD VSRPFRWELL KYGSS

Sequence ? help Back to Top

Protein Sequence Length: 895 aa Download sequence

MNDEAKCGKK PKVTGTTSSH AVCQVEDCRT DLSNAKDYHR RHRVCDMHSK ASKALVGNVM  60
QRFCQQCSRF HVLQEFDDGK RSCRRRLAGH NRRRRKTNPD NERSSSYLLI SLLRILSNMH  120
SNNSDQTKDQ DLLSQLLRSL ASLTGSTIGR NISGLPQGSQ GVVNAGASLG NLEKVTDVVS  180
NGTERATPSG SASKIDGCAN VPDRQGPMGH CGTLPASDLA QKRANDDVQD GSLSDSPSKI  240
LIPSGASFPF RANEPEATVG RIRMNNIDLN NVYNDSQDYV DNLERALVLK NPVNGSLHSS  300
VCLSESHKSS PHQQSGNSDS TSGQSPCTSS GEAQSCTNRI VFKLFGKDPN NFPIALRRQI  360
LDWLSHSPTD IESYIRPGCI ILTIYLRLGE SAWEELFCDL GSSLRRLVDM SNDSFWKTGW  420
VYARVQHSVA FIYNGRVLLD TTLPLKSDKN CRISSIKPIA VSVTEGAQFL VKGFNLNQSG  480
TRLLCAIEGK YLVQESCCNL MEVVDPVNEH DELQYLSFHC SIPNVSGRGF IEVEGHGLSS  540
TFFPFIVAEQ EVCSEICTLE GVIETAVPTV DINKDVEKME TKNQALDFIH EMGWLLHRNH  600
LSWRLGHLNP NSYLFPFRRF KWLMEFSMDH DWCAVVKKLL GILFDGTIDL RDHSSIEFAL  660
LDMCLLHRAV QRNCRPMVEL LLRYVPDKVL DKSGSEKPKV DGNNYGFMFK PNVAGPAGLT  720
PLHVAASRGG SENVLDALTE DPGSAAIEAW RSARDSTGLT PNDYACLRGH YSYIHLVQRK  780
INKKSECGHV VLDIPRTMLD SNSKQKLSDG TRLEKAASLE TENIKMKTRR QCCKACEQKL  840
ANRNSRTSPV YRPAMLSMVA IAAVCVCMAL LFKSSPEVLD VSRPFRWELL KYGSS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47070.1	0.0	SBP family protein