PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022721716.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 681aa MW: 75358.7 Da PI: 6.8694

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022721716.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	50.1	6.9e-16	323	382	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pse.ng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s+y+GV++++++gr++A+++d ++ g ++ ++++lg ++ +e+Aa+a++ a++k++g XP_022721716.1 323 SQYRGVTRHRWTGRFEAHLWDnSCKkEGqtRKgRQVYLGGYDMEEKAARAYDLAALKYWG 382 78*****************988886678446***********************98 PP
2	AP2	45.6	1.7e-14	427	476	3	55
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022721716.1 427 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 476 9*************988532...5**********************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 681 aa Download sequence
MKTMNDNSNG CNNNWLGFSL SPHMKMEVAI DPQHSHHQFH HHSQASAAAS VSNAVSTSFY 60 LSSHLNGSGI CCEVGESGGF NAPLSVMPLK SDGSLCIMEA LSRSQSEGIV PTSSPKLEDF 120 LGGATMETHQ YGSHERETMA LSSDSMYYHE NTDQEANRQH SLYLLQEPFR QQDQEFAVQT 180 HPYYSGLGCQ GMYQSPLEEE TKDAQLADCD SQISRMQETM TCFKNWVSRH YNNSSLEQQM 240 TASMIDDGAA SGSVRAMGCG DLQSLSLSMS PGSQSSCVTA SRQISPPATE CAAMEIKKRG 300 SGKVGQKQPV HRKSIDTFGQ RTSQYRGVTR HRWTGRFEAH LWDNSCKKEG QTRKGRQVYL 360 GGYDMEEKAA RAYDLAALKY WGPSTHINFP LEKYREELEE MKNMSRQEYV AHLRRKSSGF 420 SRGASMYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGVNAV 480 TNFDITRYDV ERIMASNTLL TGELARRNKE ADSNNEASDN NTPSLTNGET VQPEVNNGNG 540 LDRKMALYPL PQQQPSVDDV VSLEQKYMST GSYRNPSFSM ALQDLIGVDS VSSSQPMVDE 600 STKLGTHYSN PTSLVTSVNN SREGSPDKTG PKMLFAKPPL ASKFITPTNG VSWFPSAASQ 660 LRPAAAVSMA HLPLFATWND T

Sequence ? help Back to Top

Protein Sequence Length: 681 aa Download sequence

MKTMNDNSNG CNNNWLGFSL SPHMKMEVAI DPQHSHHQFH HHSQASAAAS VSNAVSTSFY  60
LSSHLNGSGI CCEVGESGGF NAPLSVMPLK SDGSLCIMEA LSRSQSEGIV PTSSPKLEDF  120
LGGATMETHQ YGSHERETMA LSSDSMYYHE NTDQEANRQH SLYLLQEPFR QQDQEFAVQT  180
HPYYSGLGCQ GMYQSPLEEE TKDAQLADCD SQISRMQETM TCFKNWVSRH YNNSSLEQQM  240
TASMIDDGAA SGSVRAMGCG DLQSLSLSMS PGSQSSCVTA SRQISPPATE CAAMEIKKRG  300
SGKVGQKQPV HRKSIDTFGQ RTSQYRGVTR HRWTGRFEAH LWDNSCKKEG QTRKGRQVYL  360
GGYDMEEKAA RAYDLAALKY WGPSTHINFP LEKYREELEE MKNMSRQEYV AHLRRKSSGF  420
SRGASMYRGV TRHHQHGRWQ ARIGRVAGNK DLYLGTFSTQ EEAAEAYDIA AIKFRGVNAV  480
TNFDITRYDV ERIMASNTLL TGELARRNKE ADSNNEASDN NTPSLTNGET VQPEVNNGNG  540
LDRKMALYPL PQQQPSVDDV VSLEQKYMST GSYRNPSFSM ALQDLIGVDS VSSSQPMVDE  600
STKLGTHYSN PTSLVTSVNN SREGSPDKTG PKMLFAKPPL ASKFITPTNG VSWFPSAASQ  660
LRPAAAVSMA HLPLFATWND T

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G37750.1	1e-130	AP2 family protein