PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022721637.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 698aa    MW: 77907.8 Da    PI: 6.5124
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022721637.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.11.6e-23130229197
                     EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f+kvlt sd++++g +++ +k+a+e+     +++ + +++l+ +d++g +W++k+i+r++++r++lt+GW+ Fv +++L +gD++vF   + +++
  XP_022721637.1 130 FCKVLTASDTSTHGGFSVLRKHATEClppldMNQATPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFL--RGENE 222
                     99****************************9555556679************************************************..34788 PP

                     ..EEEEE CS
              B3  91 elvvkvf 97 
                     el+v+v+
  XP_022721637.1 223 ELRVGVR 229
                     8899987 PP
2Auxin_resp106.72.5e-35256335183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha+st++ F v+Y+Pr+  s+F+v ++k+++al++ ++vGmRfkm+fe+eds+err+sGt+vgv+d++p rW++SkWrsLk
  XP_022721637.1 256 ASHAVSTQTLFVVYYKPRT--SQFIVGMNKYLQALNSDFTVGMRFKMRFEGEDSPERRFSGTIVGVEDFSP-RWQDSKWRSLK 335
                     789***************6..9*************************************************.*********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 698 aa     Download sequence    
MLANRGGSFS QTNNVSSEGN GGDDLYMELW KLCAGPLVEV PRAKERVYYF PQGHMEQLEA  60
STNQELNQRI PLFNLPSKIL CRVLHIQLLA EQETDEVYAQ ITLLPEPNQP EPTTPDPCPP  120
ESQRPTVHSF CKVLTASDTS THGGFSVLRK HATECLPPLD MNQATPTQEL VAKDLHGYEW  180
RFKHIFRGQP RRHLLTTGWS TFVTSKRLVA GDSFVFLRGE NEELRVGVRC VSRQQSNMPS  240
SVISSQSMHL GVLATASHAV STQTLFVVYY KPRTSQFIVG MNKYLQALNS DFTVGMRFKM  300
RFEGEDSPER RFSGTIVGVE DFSPRWQDSK WRSLKVQWDE PASFPRPDRV SPWEIEPFAA  360
PVPPTLAQPV AAKNKRPRPH AEIPAHDLSS TASAPWNPGV MHSPDLIRHN INAEGKRNES  420
PSMWCHMQTE MNSSCSSVSK TRNEGSWLSS PGMSVSQPLF PAAREDNKSV SAWPVLSGFS  480
NPQPNNDSTF DPIEKLKKSE TAASCRLFGI ELINHSGNST PLERTHTQLS TMTTGTSEKH  540
GPSTLSTTDS DLKSDISKDS KEKKQEQLQL SAKEIQSRQS CSSSTRSRTK VQMQGVAVGR  600
AVDLAMLEGY DQLMDQLEEM FNIKGELCPR SKWEIVYTDD EGDMMLVGDD PWLEFCNMVR  660
RIFICSSQDV KKMSTGGKLP MASIEGEGTV ISSDSAEN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1375379KRPRP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G23980.10.0ARF family protein