PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022721534.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 499aa MW: 54643.4 Da PI: 8.898 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.2 | 1.4e-05 | 129 | 151 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022721534.1 129 FVCEICNKGFQRDQNLQLHRRGH 151 89*******************88 PP | |||||||
2 | zf-C2H2 | 13.4 | 0.00023 | 205 | 227 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_022721534.1 205 WKCEKCSKRYAVQSDWKAHSKTC 227 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 499 aa Download sequence |
MMKGLLFHQQ QQQQRALEEN MSNLTSAISG EASVSSGNRT EAATNYTQQY FSSPPPQTQP 60 VKRKRNLPGN PGLGSNPYLN TIISIAYFIC FWDLNLKIFY AFFGCFFESD PDAEVIALSP 120 KTLMARNRFV CEICNKGFQR DQNLQLHRRG HNLPWKLKQR TSKEVRKKVY VCPEPSCVHH 180 DPSRALGDLT GIKKHFFRKH GEKKWKCEKC SKRYAVQSDW KAHSKTCGTR EYRCDCGTLF 240 SRRDSFITHR AFCDALAEES ARTITGANPL LSPHQPGASS AAASHINLQD IQLQAFSLKK 300 EQHSFSTALR PEIPTWLASQ PMLGAGLGPP QPIDLSSSSS SIFSSRLDHQ EFTQTHHQDL 360 TLHENPSPNP SLGPTLPQYH PTTVTSPHMS ATALLQKAAQ MGATMSSKTG LSSAPATTAT 420 AAAVSFLRPH QQTHVSAGSA GSNDDTTAGF GLNLSSSEEL AVGSSGFIHG LAPFGNHKPA 480 TAANAGDHAA GSEGWEFHQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 156 | 168 | KLKQRTSKEVRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G55110.1 | 1e-116 | C2H2 family protein |