PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022721533.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 569aa MW: 61775.9 Da PI: 9.5287 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17 | 1.6e-05 | 91 | 113 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022721533.1 91 FVCEICNKGFQRDQNLQLHRRGH 113 89*******************88 PP | |||||||
2 | zf-C2H2 | 13.2 | 0.00027 | 167 | 189 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_022721533.1 167 WKCEKCSKRYAVQSDWKAHSKTC 189 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 569 aa Download sequence |
MMKGLLFHQQ QQQQRALEEN MSNLTSAISG EASVSSGNRT EAATNYTQQY FSSPPPQTQP 60 VKRKRNLPGN PDPDAEVIAL SPKTLMARNR FVCEICNKGF QRDQNLQLHR RGHNLPWKLK 120 QRTSKEVRKK VYVCPEPSCV HHDPSRALGD LTGIKKHFFR KHGEKKWKCE KCSKRYAVQS 180 DWKAHSKTCG TREYRCDCGT LFSRRDSFIT HRAFCDALAE ESARTITGAN PLLSPHQPGA 240 SSAAASHINL QDIQLQAFSL KKEQHSFSTA LRPEIPTWLA SQPMLGAGLG PPQPIDLSSS 300 SSSIFSSRLD HQEFTQTHHQ DLTLHENPSP NPSLGPTLPQ YHPTTVTSPH MSATALLQKA 360 AQMGATMSSK TGLSSAPATT ATAAAVSFLR PHQQTHVSAG SAGSNDDTTA GFGLNLSSSE 420 ELAVGSSGFI HGLAPFGNHK PATAANAGDH AAGSGAPPSL LQNMMNSFSS TTGFDATSFD 480 DIAFGGILNA KKGGSFTNES FLKTTTTTPT TIATRNDHET GVSTQGLTRD FLGLRAFSHS 540 DILNIAGLRS NSMNTSHEQR NYSEKRWQG |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 118 | 130 | KLKQRTSKEVRKK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G55110.1 | 1e-124 | C2H2 family protein |