PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022721531.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 607aa MW: 66194.1 Da PI: 9.1251

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022721531.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.9	1.8e-05	129	151	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022721531.1 129 FVCEICNKGFQRDQNLQLHRRGH 151 89*******************88 PP
2	zf-C2H2	13.1	0.00029	205	227	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_022721531.1 205 WKCEKCSKRYAVQSDWKAHSKTC 227 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 607 aa Download sequence
MMKGLLFHQQ QQQQRALEEN MSNLTSAISG EASVSSGNRT EAATNYTQQY FSSPPPQTQP 60 VKRKRNLPGN PGLGSNPYLN TIISIAYFIC FWDLNLKIFY AFFGCFFESD PDAEVIALSP 120 KTLMARNRFV CEICNKGFQR DQNLQLHRRG HNLPWKLKQR TSKEVRKKVY VCPEPSCVHH 180 DPSRALGDLT GIKKHFFRKH GEKKWKCEKC SKRYAVQSDW KAHSKTCGTR EYRCDCGTLF 240 SRRDSFITHR AFCDALAEES ARTITGANPL LSPHQPGASS AAASHINLQD IQLQAFSLKK 300 EQHSFSTALR PEIPTWLASQ PMLGAGLGPP QPIDLSSSSS SIFSSRLDHQ EFTQTHHQDL 360 TLHENPSPNP SLGPTLPQYH PTTVTSPHMS ATALLQKAAQ MGATMSSKTG LSSAPATTAT 420 AAAVSFLRPH QQTHVSAGSA GSNDDTTAGF GLNLSSSEEL AVGSSGFIHG LAPFGNHKPA 480 TAANAGDHAA GSGAPPSLLQ NMMNSFSSTT GFDATSFDDI AFGGILNAKK GGSFTNESFL 540 KTTTTTPTTI ATRNDHETGV STQGLTRDFL GLRAFSHSDI LNIAGLRSNS MNTSHEQRNY 600 SEKRWQG

Sequence ? help Back to Top

Protein Sequence Length: 607 aa Download sequence

MMKGLLFHQQ QQQQRALEEN MSNLTSAISG EASVSSGNRT EAATNYTQQY FSSPPPQTQP  60
VKRKRNLPGN PGLGSNPYLN TIISIAYFIC FWDLNLKIFY AFFGCFFESD PDAEVIALSP  120
KTLMARNRFV CEICNKGFQR DQNLQLHRRG HNLPWKLKQR TSKEVRKKVY VCPEPSCVHH  180
DPSRALGDLT GIKKHFFRKH GEKKWKCEKC SKRYAVQSDW KAHSKTCGTR EYRCDCGTLF  240
SRRDSFITHR AFCDALAEES ARTITGANPL LSPHQPGASS AAASHINLQD IQLQAFSLKK  300
EQHSFSTALR PEIPTWLASQ PMLGAGLGPP QPIDLSSSSS SIFSSRLDHQ EFTQTHHQDL  360
TLHENPSPNP SLGPTLPQYH PTTVTSPHMS ATALLQKAAQ MGATMSSKTG LSSAPATTAT  420
AAAVSFLRPH QQTHVSAGSA GSNDDTTAGF GLNLSSSEEL AVGSSGFIHG LAPFGNHKPA  480
TAANAGDHAA GSGAPPSLLQ NMMNSFSSTT GFDATSFDDI AFGGILNAKK GGSFTNESFL  540
KTTTTTPTTI ATRNDHETGV STQGLTRDFL GLRAFSHSDI LNIAGLRSNS MNTSHEQRNY  600
SEKRWQG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	156	168	KLKQRTSKEVRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G55110.1	1e-115	C2H2 family protein