PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022721325.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ARF | ||||||||
Protein Properties | Length: 676aa MW: 74844.3 Da PI: 6.4132 | ||||||||
Description | ARF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | B3 | 68.9 | 7.1e-22 | 127 | 227 | 1 | 98 |
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f+k+lt sd++++g +++ +++a+++ ++++ + +l+ +d++g++W +++i+r++++r++lt+GW+ Fv++++L +gD ++F + XP_022721325.1 127 FCKTLTASDTSTHGGFSVLRRHADDClppldmtQQPPWQ--ELVATDLHGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFL--RGA 217 99****************************975444444..8************************************************..348 PP EE..EEEEE- CS B3 89 efelvvkvfr 98 ++el+v+v+r XP_022721325.1 218 NGELRVGVRR 227 9999***997 PP | |||||||
2 | Auxin_resp | 114.1 | 1.3e-37 | 253 | 335 | 1 | 83 |
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 a+ha++t+s+F+v+Y+Pr+s+seF+v+v+k+++a ++k+svGmRfkm+fe+e+++err+sGt+vgv d +++ W +S+WrsLk XP_022721325.1 253 ASHAIATRSMFSVFYKPRTSRSEFIVSVNKYLEARNSKLSVGMRFKMRFEGEEVPERRFSGTIVGVGDNKSTGWADSEWRSLK 335 789******************************************************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 676 aa Download sequence |
MAFAASNLPS AEQQTGVIDD SLYRELWHAC AGPLVTLPRD GERVYYFPQG HMEQLEASMH 60 QGLEHQMPSF NLPSKILCKV ASVQLKAEPD TDEVYGQITL VPEADQSEVT SPDDPLPAPE 120 RCIVHSFCKT LTASDTSTHG GFSVLRRHAD DCLPPLDMTQ QPPWQELVAT DLHGNEWHFR 180 HIFRGQPRRH LLTTGWSVFV SSKKLVAGDA FIFLRGANGE LRVGVRRLMR QQANMPSSVI 240 SSHSMHLGVL ATASHAIATR SMFSVFYKPR TSRSEFIVSV NKYLEARNSK LSVGMRFKMR 300 FEGEEVPERR FSGTIVGVGD NKSTGWADSE WRSLKVQWDE PSSILRPDRV SPWELELLVA 360 TNTSSNSPPA QRNKRARPSV LPSSSSDLSS LVGMRKSPVE SSAFSYCEAQ RGQPSPKFSS 420 AGKPNSVSFS GNGSLAAASS NLTYWSNRVE SVRESFAPVV SKESYERKQG TGNGCRLFGI 480 QLLDNVNMEE NSPVATVSGT GGDDRPVPSL DADSDQHSDP SNLNRSDLPS ISCDPEKSCM 540 RSPQEWQSKQ IRSCTKVHMQ GMAVGRAVDL TRFDCFKDLL AKLEEMFDIR GQLCGSAKNW 600 QVVYTDDEED MMMVGDDPWN EFCNMVRKIF IYTSDEVKKL SPKIKLPVND DIIPPKPGGD 660 AVVNPDDRSS VVGPGC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G59750.2 | 0.0 | ARF family protein |