PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Previous version: v3.0 v4.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022721279.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LSD
Protein Properties Length: 100aa    MW: 11299 Da    PI: 8.3975
Description LSD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022721279.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-LSD140.64.2e-13731125
         zf-LSD1  1 CggCrtlLsYPrGApsVRCalCdtV 25
                    C+gCr +L YPrGA++V+CalC t+
  XP_022721279.1  7 CSGCRSILLYPRGATNVCCALCTTI 31
                    **********************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 100 aa     Download sequence    
MQSQLVCSGC RSILLYPRGA TNVCCALCTT ITQSPPPGLI VCQLEWDGNG LTHMWRLSNI  60
ANVHTWSNKY GEVFTSRKQT YWVNCSRDYA IYFNKPISCS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G32540.17e-16LSD family protein