PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022721026.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRF

Protein Properties

Length: 611aa MW: 66283.4 Da PI: 6.7956

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022721026.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	77.1	1.8e-24	219	263	1	45
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 d+epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e XP_022721026.1 219 DPEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKPVEG 263 79****************************************985 PP
2	QLQ	56	1.2e-19	149	185	1	37
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 ++F+++Q+ +L++Q+l+yKy+ an+P+P++Ll +i+k XP_022721026.1 149 GPFSPSQWVELEHQALIYKYITANLPIPSNLLIPIRK 185 59*********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 611 aa Download sequence
MDLAVVGLEG FVGSETTGFT SLASDPETKQ KWYGSGFLKQ ERSGNNEDDW RSSKLAKNDD 60 FTASKAMLLQ QRNAFWRSNA SILSDGQEQQ QMLSFSAPKS EAFSVDRSYE NVTFPYFHLK 120 SSAYTRNTGH NTGGFNGANM HGVLAGARGP FSPSQWVELE HQALIYKYIT ANLPIPSNLL 180 IPIRKAFDSA DFSSFSGGLL RPNTLGWGTF HLGFSNNTDP EPGRCRRTDG KKWRCSRDAV 240 ADQKYCERHM NRGRHRSRKP VEGQSGHSAA ATTATTTKQM PNVSSCSASM VGPVSGSGES 300 NSLAIAQQQF KNLQPGGASN LSAADPLNRL LLNKVTVGEM IHDTEPGLTM ISPSGDLKSK 360 ENPFLIPKQQ ISYVEISRNE FGGVSSDSLL NASHKNPSLI ECRNFVSSQD LTSQETESQH 420 SLRQFMDDWP KSQSDSSAIS WPEVDVQSDR TQLSISIPMA VSDFMSSTSS PNNEKVTLSP 480 LRLSREFDPT HMGLGVGSVI NEPNQRQANW IPVSWDTSMG GPLGEVLHST NGSTADYKNS 540 SLNLMTQGWD NSPRIGSSPT GVLQKTTFGS LSNSSAGSSP GAENNKTHES ASLCNDLLGS 600 TLVHSSSLPA L

Sequence ? help Back to Top

Protein Sequence Length: 611 aa Download sequence

MDLAVVGLEG FVGSETTGFT SLASDPETKQ KWYGSGFLKQ ERSGNNEDDW RSSKLAKNDD  60
FTASKAMLLQ QRNAFWRSNA SILSDGQEQQ QMLSFSAPKS EAFSVDRSYE NVTFPYFHLK  120
SSAYTRNTGH NTGGFNGANM HGVLAGARGP FSPSQWVELE HQALIYKYIT ANLPIPSNLL  180
IPIRKAFDSA DFSSFSGGLL RPNTLGWGTF HLGFSNNTDP EPGRCRRTDG KKWRCSRDAV  240
ADQKYCERHM NRGRHRSRKP VEGQSGHSAA ATTATTTKQM PNVSSCSASM VGPVSGSGES  300
NSLAIAQQQF KNLQPGGASN LSAADPLNRL LLNKVTVGEM IHDTEPGLTM ISPSGDLKSK  360
ENPFLIPKQQ ISYVEISRNE FGGVSSDSLL NASHKNPSLI ECRNFVSSQD LTSQETESQH  420
SLRQFMDDWP KSQSDSSAIS WPEVDVQSDR TQLSISIPMA VSDFMSSTSS PNNEKVTLSP  480
LRLSREFDPT HMGLGVGSVI NEPNQRQANW IPVSWDTSMG GPLGEVLHST NGSTADYKNS  540
SLNLMTQGWD NSPRIGSSPT GVLQKTTFGS LSNSSAGSSP GAENNKTHES ASLCNDLLGS  600
TLVHSSSLPA L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22840.1	1e-110	GRF family protein