PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022720955.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | MIKC_MADS | ||||||||
Protein Properties | Length: 264aa MW: 30423 Da PI: 9.9634 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 99.1 | 1.7e-31 | 9 | 58 | 1 | 50 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 krien++nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fss+g+lyey+ XP_022720955.1 9 KRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALIVFSSRGRLYEYA 58 79***********************************************8 PP | |||||||
2 | K-box | 112.7 | 3.6e-37 | 77 | 171 | 5 | 98 |
K-box 5 sgks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 s++ ++ea+a+ +qqe++kL+k+i+nLq ++Rh++Ge+L+sL +k+L++L ++Lek+l++iR+kKnell+++ie++qk+e +lq++n+ Lr+k+ XP_022720955.1 77 SNTGsVSEATAQFYQQEADKLRKQIRNLQDTNRHMVGESLGSLPMKDLKSLGTRLEKGLSRIRAKKNELLFAEIEYMQKREIDLQNNNQLLRAKV 171 344459**************************************************************************************997 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 264 aa Download sequence |
MGRGKIEIKR IENTTNRQVT FCKRRNGLLK KAYELSVLCD AEVALIVFSS RGRLYEYANN 60 SVKTIIERYK KASADSSNTG SVSEATAQFY QQEADKLRKQ IRNLQDTNRH MVGESLGSLP 120 MKDLKSLGTR LEKGLSRIRA KKNELLFAEI EYMQKREIDL QNNNQLLRAK VLSFLSFVNE 180 WCSTVLLSLY LAIIETLMTR GPLYFMLQIA ENERKQQNMN LMPGGSNFEV MHSQPFDSRN 240 FFQINALQPA NHYPHQDQMA LQLV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G18960.1 | 1e-112 | MIKC_MADS family protein |