PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022720912.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YA
Protein Properties Length: 346aa    MW: 37784.2 Da    PI: 9.1554
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022720912.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.63.7e-32186242158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     dep+YVNaKQy++Il+RR+ Rakle+++k+ +k rkpylheSRh hAl+R+Rg+gGrF
  XP_022720912.1 186 DEPVYVNAKQYHAILRRREYRAKLEAQNKV-IKIRKPYLHESRHLHALKRARGNGGRF 242
                     79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MQNWHEKDSS ISSHSTGTYV VGCSSWGNST ESRVQQSSMS ESLSLKMGVL PQHFHNTKQL  60
GFQFQDQDSS STQSTGQSYP EVASAGVGNL YGQSLISASS GGNGTHGKLG GGYAKLAFTM  120
GTQDNAFPSS QVDYSKSIAH VPLHFAEPYF GSVMGAAYPP QAMIHHAHMM GILPARVPLP  180
LDLTEDEPVY VNAKQYHAIL RRREYRAKLE AQNKVIKIRK PYLHESRHLH ALKRARGNGG  240
RFLNTKKLQE SKHIPTSHDL DVSRSPPQLH LSANISKSEV HQLENYKGAA STTSCSDVTS  300
ASYNDERFQQ PDFRFSVYPS HIGGAMVGHA GVMHGGGNLH HLSGLC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72830.18e-72NF-YA family protein