PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022720548.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 418aa MW: 46397.1 Da PI: 9.3387

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022720548.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.5	0.00011	172	195	1	23
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C++Cg+ F+ + ++ H + H XP_022720548.1 172 FVCQKCGENFKKLEAMEAHHLSrH 195 89*****************98877 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MMPEAWFCLK RSVKCKPELS DVQDPKGNSS ETRQPCLCRS GCSRSISNLR DVIHGSKRHT 60 DKAAIGSPRS IGSSDILNPI IHQVVFTGSK CELKINTRCC DDNGSDKRGS TFVGTLRPGT 120 PGPGNRLMEP VYSGRRSFGL SRTILGGPSF SGSSNGISSR PRKFLDAESQ GFVCQKCGEN 180 FKKLEAMEAH HLSRHTVTAL SEGDSSKKIV ELICQTGFSE SENKFGHIER ILKVHNMQRT 240 LAQFEDYREM VKIKANKLSK KHPRCLADGN ELLRFYGTTV ACSLGTKNTS SLCTLEKCGV 300 CQTLRHGFFT KKESNIFRGV FTSSKSRRAF ECIELDEGNR INRYLRKALV VCRVIAGRIH 360 KPLENLQEME GQSSFDSVAG KVDCHSNIEE LYSLNPRALL PCFVVICKPS KQTAETIT

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MMPEAWFCLK RSVKCKPELS DVQDPKGNSS ETRQPCLCRS GCSRSISNLR DVIHGSKRHT  60
DKAAIGSPRS IGSSDILNPI IHQVVFTGSK CELKINTRCC DDNGSDKRGS TFVGTLRPGT  120
PGPGNRLMEP VYSGRRSFGL SRTILGGPSF SGSSNGISSR PRKFLDAESQ GFVCQKCGEN  180
FKKLEAMEAH HLSRHTVTAL SEGDSSKKIV ELICQTGFSE SENKFGHIER ILKVHNMQRT  240
LAQFEDYREM VKIKANKLSK KHPRCLADGN ELLRFYGTTV ACSLGTKNTS SLCTLEKCGV  300
CQTLRHGFFT KKESNIFRGV FTSSKSRRAF ECIELDEGNR INRYLRKALV VCRVIAGRIH  360
KPLENLQEME GQSSFDSVAG KVDCHSNIEE LYSLNPRALL PCFVVICKPS KQTAETIT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G27240.1	1e-137	C2H2 family protein