PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022720461.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Protein Properties

Length: 442aa MW: 50160 Da PI: 6.1284

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022720461.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	56.5	5e-18	207	303	2	96
EEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEE.TTS-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE. CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltled.esgrsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsefe 91 +k+l++sdv+++gr+vlpkk ae + ++ +e++ ++++d s++ W++k+++ ++ks++yvl+ ++ +Fvk+ngL+ gD+++++ ++++++ XP_022720461.1 207 KKELKNSDVGSLGRIVLPKKEAEVNlpTLSDKEGILVMIKDvYSNQMWTLKYKFwsNNKSRMYVLE-NTGDFVKQNGLEIGDSLTLY--EDESKN 298 6899****************99955666899****778899*99888888889999.******************..557776 PP .EEEE CS B3 92 lvvkv 96 l++ + XP_022720461.1 299 LYFFI 303 76655 PP

Sequence ? help Back to Top
Protein Sequence Length: 442 aa Download sequence
MENSYMPFSP TTTTTANTTL RLPNKGWSQN SGFCIYEPMN SKNFSSTPSS TPSNSQFHHP 60 SQLVAPYQSL QLPHRQPTEQ AGHSLAYLVY PFFLGQNGIE FGESSSIQAS NGVQGSCFIQ 120 TDGLSEEQER RILDPYITKV ARIRRKQARQ RSLGLQRSAS SGASIQVEER RLTSSGADTD 180 VNNNNDTKRD LYMFCTPDNK RLRMLLKKEL KNSDVGSLGR IVLPKKEAEV NLPTLSDKEG 240 ILVMIKDVYS NQMWTLKYKF WSNNKSRMYV LENTGDFVKQ NGLEIGDSLT LYEDESKNLY 300 FFILKVERFA AEASNNQHCD NVNNNNHMYL PFTCQSRDEE ETSIELLIEQ LKHKEQQEPN 360 DFMTLPMDAA YSGRLPKEAR HFLSDTFSSR ETYSQITATT LQTSSTSIRG KARSVDDIQI 420 NFDDGYGGLD MLPDVSLYNF SL

Sequence ? help Back to Top

Protein Sequence Length: 442 aa Download sequence

MENSYMPFSP TTTTTANTTL RLPNKGWSQN SGFCIYEPMN SKNFSSTPSS TPSNSQFHHP  60
SQLVAPYQSL QLPHRQPTEQ AGHSLAYLVY PFFLGQNGIE FGESSSIQAS NGVQGSCFIQ  120
TDGLSEEQER RILDPYITKV ARIRRKQARQ RSLGLQRSAS SGASIQVEER RLTSSGADTD  180
VNNNNDTKRD LYMFCTPDNK RLRMLLKKEL KNSDVGSLGR IVLPKKEAEV NLPTLSDKEG  240
ILVMIKDVYS NQMWTLKYKF WSNNKSRMYV LENTGDFVKQ NGLEIGDSLT LYEDESKNLY  300
FFILKVERFA AEASNNQHCD NVNNNNHMYL PFTCQSRDEE ETSIELLIEQ LKHKEQQEPN  360
DFMTLPMDAA YSGRLPKEAR HFLSDTFSSR ETYSQITATT LQTSSTSIRG KARSVDDIQI  420
NFDDGYGGLD MLPDVSLYNF SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28300.1	7e-58	B3 family protein