PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022720260.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family TCP
Protein Properties Length: 470aa    MW: 51204.2 Da    PI: 9.2666
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022720260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP121.51e-37832422134
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......................ssssasec 73 
                      g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWL+++a  ai el+++                       +++sa e+
  XP_022720260.1  83 SGGKDRHSKVWTSKGLRDRRVRLSVNTAIQFYDLQDRLGYDQPSKAVEWLIKAAADAIAELPSLkgpfpdtpkqlsyekrasggtehGFESA-EV 176
                     689*************************************************************9999988888888777777555533333.22 PP

             TCP  74 .eaesssssasnsssgkaaksaakskksqksaasalnlak....esrakarararertrekmrikn 134
                       +++ ++ ++n+s++ + +++a+s+ s++s++s l+l++      rakar+rarer ++++ +++
  XP_022720260.1 177 eLDGDPNNCQHNQSQHLSLSKSACSSTSETSKNSGLSLSRsdirVNRAKARERARERAAKEKEKEQ 242
                     34444444444555556666666777777777777777775344667*********7666555543 PP

Sequence ? help Back to Top
Protein Sequence    Length: 470 aa     Download sequence    
MEVDGIQTQA RKFSRVGNGR NDSSKIGQKR SENYHDDEED GELIKRVGAN SGVGGGGGGG  60
VADTNRLRGW NHSSRIIRVS RASGGKDRHS KVWTSKGLRD RRVRLSVNTA IQFYDLQDRL  120
GYDQPSKAVE WLIKAAADAI AELPSLKGPF PDTPKQLSYE KRASGGTEHG FESAEVELDG  180
DPNNCQHNQS QHLSLSKSAC SSTSETSKNS GLSLSRSDIR VNRAKARERA RERAAKEKEK  240
EQESRVAHHQ NVNPISQNSS FTELLTGGIG SVSNNNTSST ASAHQNPNAE PYFFHKANTA  300
RQWPVTQMDC FTTGLLGPSS SSSRSHHSSG FPGPIQLGNS LPQAIPIPPF NALSENHQEL  360
QHFSFVPNPE HLIPVATTQP GPGGDYNLNF TISSFLAGFN RGTLQSNSPS FLPHHLQRLS  420
SMDGSSPFYI GTPPMENHHH YQFPAGLDGR LQLCYGDGSR SSDQKGKGKN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.17e-41TCP family protein