PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022720260.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | TCP | ||||||||
Protein Properties | Length: 470aa MW: 51204.2 Da PI: 9.2666 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 121.5 | 1e-37 | 83 | 242 | 2 | 134 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......................ssssasec 73 g+kdrhsk+ T++g+RdRRvRls+++a++f+dLqd+LG+d++sk++eWL+++a ai el+++ +++sa e+ XP_022720260.1 83 SGGKDRHSKVWTSKGLRDRRVRLSVNTAIQFYDLQDRLGYDQPSKAVEWLIKAAADAIAELPSLkgpfpdtpkqlsyekrasggtehGFESA-EV 176 689*************************************************************9999988888888777777555533333.22 PP TCP 74 .eaesssssasnsssgkaaksaakskksqksaasalnlak....esrakarararertrekmrikn 134 +++ ++ ++n+s++ + +++a+s+ s++s++s l+l++ rakar+rarer ++++ +++ XP_022720260.1 177 eLDGDPNNCQHNQSQHLSLSKSACSSTSETSKNSGLSLSRsdirVNRAKARERARERAAKEKEKEQ 242 34444444444555556666666777777777777777775344667*********7666555543 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 470 aa Download sequence |
MEVDGIQTQA RKFSRVGNGR NDSSKIGQKR SENYHDDEED GELIKRVGAN SGVGGGGGGG 60 VADTNRLRGW NHSSRIIRVS RASGGKDRHS KVWTSKGLRD RRVRLSVNTA IQFYDLQDRL 120 GYDQPSKAVE WLIKAAADAI AELPSLKGPF PDTPKQLSYE KRASGGTEHG FESAEVELDG 180 DPNNCQHNQS QHLSLSKSAC SSTSETSKNS GLSLSRSDIR VNRAKARERA RERAAKEKEK 240 EQESRVAHHQ NVNPISQNSS FTELLTGGIG SVSNNNTSST ASAHQNPNAE PYFFHKANTA 300 RQWPVTQMDC FTTGLLGPSS SSSRSHHSSG FPGPIQLGNS LPQAIPIPPF NALSENHQEL 360 QHFSFVPNPE HLIPVATTQP GPGGDYNLNF TISSFLAGFN RGTLQSNSPS FLPHHLQRLS 420 SMDGSSPFYI GTPPMENHHH YQFPAGLDGR LQLCYGDGSR SSDQKGKGKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G18390.1 | 7e-41 | TCP family protein |