PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022720022.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 240aa MW: 27603.3 Da PI: 9.2146

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022720022.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.5e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEd++l+ +++++G g+W++ ++ g+ R++k+c++rw +yl XP_022720022.1 14 KGPWTPEEDQILISYIQRYGHGNWRALPKQAGLPRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	50.1	6.6e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg++T E+e + ++++ lG++ W++Ia++++ gRt++++k++w+ + XP_022720022.1 67 RGNFTNKEEETIFQLHQVLGNR-WSAIAARLP-GRTDNEVKNYWHGH 111 89******************.*****.*********966 PP

Sequence ? help Back to Top
Protein Sequence Length: 240 aa Download sequence
MVRFPCCEKM GMKKGPWTPE EDQILISYIQ RYGHGNWRAL PKQAGLPRCG KSCRLRWINY 60 LRPDIKRGNF TNKEEETIFQ LHQVLGNRWS AIAARLPGRT DNEVKNYWHG HLKKKLKQRS 120 TAIEQGFGST DRQEIKEARI LLQHDQFRDR SSSLNLKPLI SSQDSPESTC LATIEQPDEL 180 ALSREQQGAV LEAAGVKLPF SALETLKING SYNVDANRDF WFKLFMENSN EVHENLGNFG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	112	118	LKKKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31180.1	3e-71	MYB family protein