PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022719842.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

AP2

Protein Properties

Length: 732aa MW: 79719.7 Da PI: 6.5446

Description

AP2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022719842.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	35	3.5e-11	304	360	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrd.pseng..kr.krfslgkfgtaeeAakaaiaarkkleg 55 s y+GV++++++gr++A+++d + ++ k + g ++ +e+Aa+a++ a++k++g XP_022719842.1 304 SIYRGVTRHRWTGRYEAHLWDnSCR-RegQTrKGRQ-GGYDKEEKAARAYDLAALKYWG 360 57*****************4444.2455535555.779999************98 PP
2	AP2	46.6	8.5e-15	403	454	1	55
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s y+GV+++++ grW A+I + +k +lg+f t eeAa+a++ a+ k++g XP_022719842.1 403 SIYRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTQEEAAEAYDIAAIKFRG 454 57**************988532...5**********************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 732 aa Download sequence
MASMNNWLAF SLSPQELPSH PVDDHQDHHS QATVSRLGFN SNEISGTDVS GECFDLTSDS 60 SAPSLNLPPP FGILEAFNRS NQSQDWNMKG LGMNSDGNYK TNSELSMLMG GSCNSQNLDQ 120 SNQEPKLENF LGNHSFSNHQ QNKLHGCNTM YNTTTGEYIF PNCSLQLPSE DTSNARTNYG 180 GDDSNNNKNN NNNNTNINTG NSSSSIGLSM IKTWLRNQPA PTQSEAKNNG SASQSLSLSM 240 GTGSQAGSPL PLLTTSTGGG SGGESSSSDN NKQQKTPTGM EITQSSASEA MPRKSIDTFG 300 QRTSIYRGVT RHRWTGRYEA HLWDNSCRRE GQTRKGRQGG YDKEEKAARA YDLAALKYWG 360 TTTTTNFPIS NYEKELEEMK HMTRQEYVAS LRRKSSGFSR GASIYRGVTR HHQHGRWQAR 420 IGRVAGNKDL YLGTFSTQEE AAEAYDIAAI KFRGLNAVTN FDMSRYDVKS ILESSTLPIG 480 GAAKRLKDVE QAEMAIDVQR ANDDTISAHL SDGINNYGAA HHGWPTIAFQ QAQPFSMHYP 540 YGQRIWCKQE QDSDANHTFQ DLHQLQLGST HNFFQPSVLR NLMAMDSSPM DHGSGSNSVI 600 YSNGGTGNDG AATNGGNGSY QGVGFGGNGG YVIPLGTVIA SDSNQNQGNG FGDNEVKAFG 660 YENIYGSADP YHSRNLYYLS QQSSAGGVKN SSYDQASACN NWVPTAVPTV TQRSSNMAVC 720 HGAPAFTVWN DT

Sequence ? help Back to Top

Protein Sequence Length: 732 aa Download sequence

MASMNNWLAF SLSPQELPSH PVDDHQDHHS QATVSRLGFN SNEISGTDVS GECFDLTSDS  60
SAPSLNLPPP FGILEAFNRS NQSQDWNMKG LGMNSDGNYK TNSELSMLMG GSCNSQNLDQ  120
SNQEPKLENF LGNHSFSNHQ QNKLHGCNTM YNTTTGEYIF PNCSLQLPSE DTSNARTNYG  180
GDDSNNNKNN NNNNTNINTG NSSSSIGLSM IKTWLRNQPA PTQSEAKNNG SASQSLSLSM  240
GTGSQAGSPL PLLTTSTGGG SGGESSSSDN NKQQKTPTGM EITQSSASEA MPRKSIDTFG  300
QRTSIYRGVT RHRWTGRYEA HLWDNSCRRE GQTRKGRQGG YDKEEKAARA YDLAALKYWG  360
TTTTTNFPIS NYEKELEEMK HMTRQEYVAS LRRKSSGFSR GASIYRGVTR HHQHGRWQAR  420
IGRVAGNKDL YLGTFSTQEE AAEAYDIAAI KFRGLNAVTN FDMSRYDVKS ILESSTLPIG  480
GAAKRLKDVE QAEMAIDVQR ANDDTISAHL SDGINNYGAA HHGWPTIAFQ QAQPFSMHYP  540
YGQRIWCKQE QDSDANHTFQ DLHQLQLGST HNFFQPSVLR NLMAMDSSPM DHGSGSNSVI  600
YSNGGTGNDG AATNGGNGSY QGVGFGGNGG YVIPLGTVIA SDSNQNQGNG FGDNEVKAFG  660
YENIYGSADP YHSRNLYYLS QQSSAGGVKN SSYDQASACN NWVPTAVPTV TQRSSNMAVC  720
HGAPAFTVWN DT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G17430.1	1e-128	AP2 family protein