PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022719790.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 409aa MW: 43428.8 Da PI: 6.9111

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022719790.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	132.4	4.2e-41	89	186	2	89
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.eaesssssasnsssg....... 88 +++k++++++hTkv+gR+RR+R++a caar+F+L++eLG+++d++tieWLlqqa+pai+++tgt++++a+++ ++s +ss+s+ s++ XP_022719790.1 89 TAAKRPTKDRHTKVDGRGRRIRMPAICAARVFQLTRELGHKSDGETIEWLLQQAEPAIIAATGTGTIPANFStLNVSLRSSGSTISAPssksapl 183 689******************************************************************99987777777777333332222233 PP TCP 89 ..k 89 + XP_022719790.1 184 sfH 186 330 PP

Sequence ? help Back to Top
Protein Sequence Length: 409 aa Download sequence
MEIMESQNNK STSSSDHHHH HGLKQESSLQ LASPDGQQQA AAAGAHGTSS HDQAQAAPAH 60 VPFMGSISNQ VGVQCSSSPT STSSLAKPTA AKRPTKDRHT KVDGRGRRIR MPAICAARVF 120 QLTRELGHKS DGETIEWLLQ QAEPAIIAAT GTGTIPANFS TLNVSLRSSG STISAPSSKS 180 APLSFHSALG FYNSNGDDSR RFSNNPAGAA MLGFHHQLYP QILNPDTSMR STNPIENYTT 240 KPFREDIFKE TSQHNAETGG VDANSAKPER TGIQDQEPGS FRTANMVPAP AMWAVAPATT 300 NGGNAFWMLP VGGGATASAS VPETQMWTFP AHYSGGGRVS PVQLGSMILQ QQQLGLGVTE 360 TNMGLLGSGI NLYNNNNRVG LGMNLEQQHQ ENHTQGSDNG DENHATDSQ

Sequence ? help Back to Top

Protein Sequence Length: 409 aa Download sequence

MEIMESQNNK STSSSDHHHH HGLKQESSLQ LASPDGQQQA AAAGAHGTSS HDQAQAAPAH  60
VPFMGSISNQ VGVQCSSSPT STSSLAKPTA AKRPTKDRHT KVDGRGRRIR MPAICAARVF  120
QLTRELGHKS DGETIEWLLQ QAEPAIIAAT GTGTIPANFS TLNVSLRSSG STISAPSSKS  180
APLSFHSALG FYNSNGDDSR RFSNNPAGAA MLGFHHQLYP QILNPDTSMR STNPIENYTT  240
KPFREDIFKE TSQHNAETGG VDANSAKPER TGIQDQEPGS FRTANMVPAP AMWAVAPATT  300
NGGNAFWMLP VGGGATASAS VPETQMWTFP AHYSGGGRVS PVQLGSMILQ QQQLGLGVTE  360
TNMGLLGSGI NLYNNNNRVG LGMNLEQQHQ ENHTQGSDNG DENHATDSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G35560.1	6e-80	TCP family protein