PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022719615.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | NAC | ||||||||
Protein Properties | Length: 105aa MW: 12003.7 Da PI: 5.6156 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 45.8 | 1.9e-14 | 4 | 64 | 67 | 128 |
NAM 67 kyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128 +y+ ++ +ra++ g W atg+++++++ ++e vg k+++vfy+g+ p+ ++++Wvm +++ XP_022719615.1 4 TYSITEQIKRAMNGGHWMATGETEQIYH-HNEIVGFKRIFVFYEGQVPTVKEASWVMFKFSV 64 566678899*******************.999*************************99976 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 105 aa Download sequence |
MTQTYSITEQ IKRAMNGGHW MATGETEQIY HHNEIVGFKR IFVFYEGQVP TVKEASWVMF 60 KFSVNSSLVV DDEPNVRSVQ RKGIIDECPV RELAASDYLS PLLCC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G07680.2 | 6e-12 | NAC family protein |