PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022719535.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TALE

Protein Properties

Length: 320aa MW: 35986.3 Da PI: 4.652

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022719535.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26.4	1.2e-08	252	284	23	55
SS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHH CS Homeobox 23 rypsaeereeLAkklgLterqVkvWFqNrRake 55 +yp++ee+ +L++ +gL+ +q+ +WF N+R ++ XP_022719535.1 252 PYPTEEEKLKLSEITGLDPKQINNWFINQRKRH 284 8*****************************885 PP
2	ELK	32.9	1.4e-11	205	225	2	22
ELK 2 LKhqLlrKYsgyLgsLkqEFs 22 +K L+rKYsgyL+sL++EF+ XP_022719535.1 205 IKGVLMRKYSGYLSSLRKEFL 225 7888****************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 320 aa Download sequence
MEDLYRLDDP TISCSNDIVR VNNFAAANFT AAVTTDFLSP VDHLLQFDHQ AADTDATGSH 60 MSDLIKTQIA GHPRYPNLVS AYIECQKVGA PPELASLLEE IGRENHPISG CSEIGADPEL 120 DEFMESYCEV LRRYKEELSK PFDEATLFLS NIESQLSNLC KGALTKTLDY RSDEAAGTSE 180 EEFSGGEVEA SESQDFPGAH PSQDIKGVLM RKYSGYLSSL RKEFLKKRKK GKLPKDARLI 240 LLDWWNNHYR WPYPTEEEKL KLSEITGLDP KQINNWFINQ RKRHWKPSED MKFALMEGVA 300 GNTGGPLYLD TEVGAGINDI

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	220	229	LRKEFLKKRK
2	226	230	KKRKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G23380.1	3e-81	TALE family protein