PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022719407.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 522aa MW: 56776.3 Da PI: 8.4969

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022719407.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.1	1.5e-05	87	109	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022719407.1 87 FVCEICNKGFQRDQNLQLHRRGH 109 89*******************88 PP
2	zf-C2H2	12.1	0.00062	163	185	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ XP_022719407.1 163 WKCDKCSKKYAVQSDWKAHSKTC 185 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 522 aa Download sequence
MSNITGDNGG SFSSGNTAGE EVQQQQEQVK NFHGSNSLLS TNSSGSTTPQ DQQPPSAKKK 60 RNLPGTPDPN AEVIALSPKT LLATNRFVCE ICNKGFQRDQ NLQLHRRGHN LPWKLRQRTS 120 NEIRKRVYVC PEPSCVHHNP ARALGDLTGI KKHFCRKHGE KKWKCDKCSK KYAVQSDWKA 180 HSKTCGTKEY KCDCGTIFSR RDSFITHRAF CDALTEENNK ASQGLVAINV GSNLQGQVPD 240 QLIPAIPINN SHDTSAMNVS DSFSHDTKSP IQLLNMAGSM FSNNPGNLFG GAKSHVSNSS 300 SSCLQLTANS STLFEGNGHL YSGLASMSAT ALLQKAAQMG ATASTGSLNS PLMGKSFTTS 360 MAPPSFVSMQ TQNNNQSQVL GDDSEFTNQF MQKSQQEIQS EFFNANGGVD QSSAVNNMGM 420 FSGVFDQNSA LLKSVENDQR GASTNSGLST PRTTCLSGFS GDMMTVDFLG IGGSRPRPLL 480 EKQHLHQQQQ DLDEFGGIDQ ARLLGLSHFQ QHTALEKPMW KV

Sequence ? help Back to Top

Protein Sequence Length: 522 aa Download sequence

MSNITGDNGG SFSSGNTAGE EVQQQQEQVK NFHGSNSLLS TNSSGSTTPQ DQQPPSAKKK  60
RNLPGTPDPN AEVIALSPKT LLATNRFVCE ICNKGFQRDQ NLQLHRRGHN LPWKLRQRTS  120
NEIRKRVYVC PEPSCVHHNP ARALGDLTGI KKHFCRKHGE KKWKCDKCSK KYAVQSDWKA  180
HSKTCGTKEY KCDCGTIFSR RDSFITHRAF CDALTEENNK ASQGLVAINV GSNLQGQVPD  240
QLIPAIPINN SHDTSAMNVS DSFSHDTKSP IQLLNMAGSM FSNNPGNLFG GAKSHVSNSS  300
SSCLQLTANS STLFEGNGHL YSGLASMSAT ALLQKAAQMG ATASTGSLNS PLMGKSFTTS  360
MAPPSFVSMQ TQNNNQSQVL GDDSEFTNQF MQKSQQEIQS EFFNANGGVD QSSAVNNMGM  420
FSGVFDQNSA LLKSVENDQR GASTNSGLST PRTTCLSGFS GDMMTVDFLG IGGSRPRPLL  480
EKQHLHQQQQ DLDEFGGIDQ ARLLGLSHFQ QHTALEKPMW KV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-106	C2H2 family protein