PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022719206.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GeBP

Protein Properties

Length: 425aa MW: 46532.1 Da PI: 4.3812

Description

GeBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022719206.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF573	112.7	2.4e-35	128	230	2	97
DUF573 2 lfqrlwseeDeivlLqGlidfkaktgk.......spsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkkaksgkepsfskehdqkif 89 lfqrlw++eDei lLqG++d+++++ ++++d+ fy+++k++++++++k+qlveK+rrLKkK+++ ++k++sgk++sf+++hdq +f XP_022719206.1 128 LFQRLWTDEDEIELLQGFLDYTTSKTNsnsssshHYHHDTALFYDQIKSKLQLDFNKNQLVEKLRRLKKKYRNVMNKISSGKDFSFKSPHDQATF 222 79*****************7766554666544456699*************************************************** PP DUF573 90 elskkiWg 97 e+s+kiW XP_022719206.1 223 EISRKIWS 230 *****6 PP

Sequence ? help Back to Top
Protein Sequence Length: 425 aa Download sequence
MASEQYDVVF EESPDDDEEP SSSDNDLDEN DDVLNGNDDA LNDEEDEELL EEDEDINSPS 60 FLPQPIATAV SSVSIPSVPL AVPSATAVTI AAVPTDESPL DTKRQRLDSA VAEKKPPPPQ 120 QFDESRRLFQ RLWTDEDEIE LLQGFLDYTT SKTNSNSSSS HHYHHDTALF YDQIKSKLQL 180 DFNKNQLVEK LRRLKKKYRN VMNKISSGKD FSFKSPHDQA TFEISRKIWS NSFGKVEDNV 240 LDDDDNNNNN NINLIDESGE KKNSTPKSAA TKKRSRTKGG KMEEKRVSND GFVISNNNYN 300 DNGNVEGIAV GGSGVGGGGG GGGGNVTVVI EEKVKSCLTP LFKELLGSVM GGGYGGRGIS 360 GLAMNAMPLS FGGSLNLGTG GGNGELMDER WRKQQILELE VYSKRLELVQ DQIKAALEEL 420 RSIGG

Sequence ? help Back to Top

Protein Sequence Length: 425 aa Download sequence

MASEQYDVVF EESPDDDEEP SSSDNDLDEN DDVLNGNDDA LNDEEDEELL EEDEDINSPS  60
FLPQPIATAV SSVSIPSVPL AVPSATAVTI AAVPTDESPL DTKRQRLDSA VAEKKPPPPQ  120
QFDESRRLFQ RLWTDEDEIE LLQGFLDYTT SKTNSNSSSS HHYHHDTALF YDQIKSKLQL  180
DFNKNQLVEK LRRLKKKYRN VMNKISSGKD FSFKSPHDQA TFEISRKIWS NSFGKVEDNV  240
LDDDDNNNNN NINLIDESGE KKNSTPKSAA TKKRSRTKGG KMEEKRVSND GFVISNNNYN  300
DNGNVEGIAV GGSGVGGGGG GGGGNVTVVI EEKVKSCLTP LFKELLGSVM GGGYGGRGIS  360
GLAMNAMPLS FGGSLNLGTG GGNGELMDER WRKQQILELE VYSKRLELVQ DQIKAALEEL  420
RSIGG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28040.1	5e-65	GeBP family protein