PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022719075.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 962aa MW: 108274 Da PI: 4.9139

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022719075.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	43.1	9.6e-14	8	53	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 g W Ede+l+ av ++G+++W++I++ + ++++kqck rw+ +l XP_022719075.1 8 GVWKNTEDEILKAAVMKYGKNQWARISSLLV-RKSAKQCKARWYEWL 53 78***************************.**********986 PP
2	Myb_DNA-binding	32.8	1.6e-10	60	103	2	48
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 WT eEde+l+++ k++++ W+tIa +g Rt+ qc +r+ k+l XP_022719075.1 60 TEWTREEDEKLLHLAKLMPTQ-WRTIAPIVG--RTPSQCLERYEKLL 103 68***************99.****8..********9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 962 aa Download sequence
MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT 60 EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACARD ENYEPGDDPR 120 KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR 180 LASLQKRREL KAAGIDTRQR KRKRKGIDYN AEIPFEKRPP SGFYDVADED RPVEQPKFPT 240 TIEELEGKRR VDIEAQLRKQ DIAKNKIAQR QDAPSAIVQA NKLNDPETVR KRSKLMLPSP 300 QISDHELEEI AKMGYASDLL SGNEELAEGS GATRALLTNY SQTPRLGMTP LRTPQRTPAG 360 KGDAIMMEAE NLARLRESQT PLLGGENPEL HPSDFSGVTP KTQIQTPNPM STPAATPGGA 420 GLTPRIGMTP SRDGYSFGLT PKGTPIRDEL HINEDMDLHD TAKLEQRRQA DIRRNLQSGL 480 SSLPQPKNEY QIVIQPPAED SEEPEEKIEE DMSDQIARER FEEEARQQAL LKKRSKVLQR 540 ELPRPPSASL ELIRDSLMRT DGDKSSFVPP TSIEQADEMI RKELLLLLEH DNAKYPLNEK 600 SNKAKKKGAK CPPNGSIPSI EDFEEEMEEA DSLIKEEAEF LRVAMGHENE SLDDFVEAHN 660 TCLNDLMYFP TRNAYGLASV AGNMEKLAAL QTEFDIVKRK MDNDKSKAES MEKKYNVLTQ 720 GYERRAVTLW RQIESTFKLM DTAGTELECF QALQKQEQLA ASHRINGIWE EVQKQKELEQ 780 TLQRRYGNLI AELERIQNLV NVYRVQAQKQ EEAAEKDCAL ELSEAVASQA DVPSSGLSES 840 APSSEHVDSS LDGHPSLKGD MNIDSGKEHA TMDMEKDGSM SVNVPLVVED IGDNITKTLN 900 GMTEDAVTSP DGAAESRNPD SVSTEQESIQ EMLEEGYTDH TKVDNSSVLG GDAAEKQTGM 960 EE

Sequence ? help Back to Top

Protein Sequence Length: 962 aa Download sequence

MRIMIKGGVW KNTEDEILKA AVMKYGKNQW ARISSLLVRK SAKQCKARWY EWLDPSIKKT  60
EWTREEDEKL LHLAKLMPTQ WRTIAPIVGR TPSQCLERYE KLLDAACARD ENYEPGDDPR  120
KLRPGEIDPN PESKPARPDP VDMDEDEKEM LSEARARLAN TRGKKAKRKA REKQLEEARR  180
LASLQKRREL KAAGIDTRQR KRKRKGIDYN AEIPFEKRPP SGFYDVADED RPVEQPKFPT  240
TIEELEGKRR VDIEAQLRKQ DIAKNKIAQR QDAPSAIVQA NKLNDPETVR KRSKLMLPSP  300
QISDHELEEI AKMGYASDLL SGNEELAEGS GATRALLTNY SQTPRLGMTP LRTPQRTPAG  360
KGDAIMMEAE NLARLRESQT PLLGGENPEL HPSDFSGVTP KTQIQTPNPM STPAATPGGA  420
GLTPRIGMTP SRDGYSFGLT PKGTPIRDEL HINEDMDLHD TAKLEQRRQA DIRRNLQSGL  480
SSLPQPKNEY QIVIQPPAED SEEPEEKIEE DMSDQIARER FEEEARQQAL LKKRSKVLQR  540
ELPRPPSASL ELIRDSLMRT DGDKSSFVPP TSIEQADEMI RKELLLLLEH DNAKYPLNEK  600
SNKAKKKGAK CPPNGSIPSI EDFEEEMEEA DSLIKEEAEF LRVAMGHENE SLDDFVEAHN  660
TCLNDLMYFP TRNAYGLASV AGNMEKLAAL QTEFDIVKRK MDNDKSKAES MEKKYNVLTQ  720
GYERRAVTLW RQIESTFKLM DTAGTELECF QALQKQEQLA ASHRINGIWE EVQKQKELEQ  780
TLQRRYGNLI AELERIQNLV NVYRVQAQKQ EEAAEKDCAL ELSEAVASQA DVPSSGLSES  840
APSSEHVDSS LDGHPSLKGD MNIDSGKEHA TMDMEKDGSM SVNVPLVVED IGDNITKTLN  900
GMTEDAVTSP DGAAESRNPD SVSTEQESIQ EMLEEGYTDH TKVDNSSVLG GDAAEKQTGM  960
EE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	205	KRRELKAAGIDTRQRKRKRK
2	200	205	RKRKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09770.1	0.0	MYB family protein