PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022718465.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 255aa MW: 27322.3 Da PI: 8.8185

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022718465.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.2	0.00027	101	123	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ykC+ C+k F++ L H +H XP_022718465.1 101 YKCSVCNKAFNSYQALGGHKASH 123 9***********99999998887 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MALEALNSPT AATAPFHFED SSLHGLESFT KRKRSKRPRF EHVPTEEEYL ALCLIMLARG 60 GGATSNSTIP YRHRSPTPTP APRPAQAQAP APTSTEQKLS YKCSVCNKAF NSYQALGGHK 120 ASHRKLSGGN DDQSTSTTTS ATAGRVTSAA SNPSGRSHEC SICHKSFPTG QALGGHKRCH 180 YEGRAGNSAS GVTTSEGVGS TITMSHINHQ DFDLNLPALP EFSPAFFVSG GDDEVESPHP 240 SKKPRFWMSP KIEVN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G27730.1	1e-64	C2H2 family protein