PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022718417.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GATA

Protein Properties

Length: 538aa MW: 59668 Da PI: 6.7857

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022718417.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	49.9	4.3e-16	7	41	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+ XP_022718417.1 7 CYHCGVTSTPLWRNGPPEKPVLCNACGSRWRTKGT 41 **************88888*********997 PP

Sequence ? help Back to Top
Protein Sequence Length: 538 aa Download sequence
MGKQGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RVEPDYYEDH 60 GTSRVKSISI NKNKEIKLLK RKPNHDIAVI AADYNQGFHK IVDEDTSNRS SSGSAISNSE 120 SCAQFGSADA SDLTGPAQSN VWDSMVPSKK RTCVNRPKPS SVEKLTKDLY TILHEQQSSY 180 FSGSSEEDLL LESDTPMVSV EIGHGSILIR HPSSIAREEE SEASSLSVEN KQYSMNEAYS 240 HSSSFPAYND SKGIKFSGLG IERAKNPAGQ GMQHEQLKRD KAQHEKSLLL ESQNSPLCNI 300 DLNDILNFEE FVKLLTNEEQ QQLLQYLPPL DIAKLPDSLK NMFKSPQFKE NLCYFQQLLE 360 EGIFNISAQG VKPEDCKTLK RLALFNLMKS QWVERHHVLK KCISIGGSVT ARRPNAITSN 420 NLVVMKRSCD SQSQNFPEAR TLKSPKQVMT KATYENKELI DNDGSCFSPR SLFALPPDGS 480 SLVLDSLHFV DESSDQDLLL DVPSNGSFPQ AELLHPTISF GQQASASSSS AHPHPVHP

Sequence ? help Back to Top

Protein Sequence Length: 538 aa Download sequence

MGKQGPCYHC GVTSTPLWRN GPPEKPVLCN ACGSRWRTKG TLANYTPLHA RVEPDYYEDH  60
GTSRVKSISI NKNKEIKLLK RKPNHDIAVI AADYNQGFHK IVDEDTSNRS SSGSAISNSE  120
SCAQFGSADA SDLTGPAQSN VWDSMVPSKK RTCVNRPKPS SVEKLTKDLY TILHEQQSSY  180
FSGSSEEDLL LESDTPMVSV EIGHGSILIR HPSSIAREEE SEASSLSVEN KQYSMNEAYS  240
HSSSFPAYND SKGIKFSGLG IERAKNPAGQ GMQHEQLKRD KAQHEKSLLL ESQNSPLCNI  300
DLNDILNFEE FVKLLTNEEQ QQLLQYLPPL DIAKLPDSLK NMFKSPQFKE NLCYFQQLLE  360
EGIFNISAQG VKPEDCKTLK RLALFNLMKS QWVERHHVLK KCISIGGSVT ARRPNAITSN  420
NLVVMKRSCD SQSQNFPEAR TLKSPKQVMT KATYENKELI DNDGSCFSPR SLFALPPDGS  480
SLVLDSLHFV DESSDQDLLL DVPSNGSFPQ AELLHPTISF GQQASASSSS AHPHPVHP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G17570.3	1e-133	GATA family protein