PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022718213.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 503aa MW: 55671.2 Da PI: 6.7538

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022718213.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	21.1	8.3e-07	258	279	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H XP_022718213.1 258 FCTICGKGFKRDANLRMHMRGH 279 6*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 503 aa Download sequence
MDLKDRLSGE IQKKVPEHPS FTNFNPQHQQ KWEDRSILDY STRIEPPFQA FNQTSKTQPL 60 LPCNPNNQIK NGPGNESLQA SKVQDWDPSA MLNNLSFLEQ KIHQLQDLVH LIVGRRGQVL 120 GRPDELVAQQ QQLITADLTS IIVQLISTAG SLLPSVKHTL SAATPSHGQF GQFSGVVFPS 180 GQGLNGGVQP QNAGGSKVSE PPNTVDISSN SGNEQNHLFE EHEMKDEEDA EEGENLVPGT 240 YEILQLEKEE ILAPHTHFCT ICGKGFKRDA NLRMHMRGHG DEYKTPAALA KPNKESSSEP 300 TLIKRYSCPY AGCKRNKDHK KFQPLKTILC VKNHYKRTHC DKSYICSRCN TKKFSVIADL 360 KTHEKHCGKD KWLCSCGTTF SRKDKLFGHI ALFQGHTPAI PLDETKGSAG TSDQGDGNQA 420 TNKVGSMNFD FSSNISSENA VQTSVDFKGS IDDPAAFFSP LNFDTCNFGG LHEFPRPPFD 480 DSESSFAFLL SGSCNYTQKS GED

Sequence ? help Back to Top

Protein Sequence Length: 503 aa Download sequence

MDLKDRLSGE IQKKVPEHPS FTNFNPQHQQ KWEDRSILDY STRIEPPFQA FNQTSKTQPL  60
LPCNPNNQIK NGPGNESLQA SKVQDWDPSA MLNNLSFLEQ KIHQLQDLVH LIVGRRGQVL  120
GRPDELVAQQ QQLITADLTS IIVQLISTAG SLLPSVKHTL SAATPSHGQF GQFSGVVFPS  180
GQGLNGGVQP QNAGGSKVSE PPNTVDISSN SGNEQNHLFE EHEMKDEEDA EEGENLVPGT  240
YEILQLEKEE ILAPHTHFCT ICGKGFKRDA NLRMHMRGHG DEYKTPAALA KPNKESSSEP  300
TLIKRYSCPY AGCKRNKDHK KFQPLKTILC VKNHYKRTHC DKSYICSRCN TKKFSVIADL  360
KTHEKHCGKD KWLCSCGTTF SRKDKLFGHI ALFQGHTPAI PLDETKGSAG TSDQGDGNQA  420
TNKVGSMNFD FSSNISSENA VQTSVDFKGS IDDPAAFFSP LNFDTCNFGG LHEFPRPPFD  480
DSESSFAFLL SGSCNYTQKS GED

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	0.0	C2H2 family protein