PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022718156.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 335aa MW: 37811.9 Da PI: 6.2362

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022718156.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.2	3.3e-17	15	62	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEd++l++ ++ +G g+W+++++ g+ R++k+c++rw +yl XP_022718156.1 15 RGLWSPEEDDKLIKHITSHGHGSWSSVPKLAGLQRCGKSCRLRWINYL 62 788*******************************************97 PP
2	Myb_DNA-binding	56.5	6.2e-18	68	111	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T+eE+++++d+++ lG++ W+ Ia++++ gRt++++k++w++ XP_022718156.1 68 RGSFTAEEEQIIIDVHRILGNR-WAQIAKHLP-GRTDNEVKNFWNS 111 89******************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
MEMGHRCCSK QKVKRGLWSP EEDDKLIKHI TSHGHGSWSS VPKLAGLQRC GKSCRLRWIN 60 YLRPDLKRGS FTAEEEQIII DVHRILGNRW AQIAKHLPGR TDNEVKNFWN SCIKKKLLSQ 120 GLDPKTHNLL SSRQRASNKL ACHYSSSLPQ QQSFTVFNMS SQNRDANMVM MNPPVLTLPA 180 PPPPPPDQSM AMQIANSECE GHNVLGTCYG QNLNESTIFP YGSSMDSTII TSSSSSSIQL 240 CGFNNLLDEN PCIWDANAMV ETFEEPRVEG VKPQEQQQQQ EKEKISEMAM DKIDEMSMDA 300 SFENCSFDLG LLESTLFPPA MCRDLSSMDD FAWNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12720.1	2e-87	MYB family protein