PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022717824.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 182aa    MW: 20969.4 Da    PI: 4.5258
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022717824.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF58.77.4e-192168148
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
                    k+ien+++r v fskR++g+lKKA  LS L + e+ vii+s++g++y+
  XP_022717824.1 21 KKIENQRKRWVAFSKRKKGLLKKAAQLSMLSGEEIGVIIISEQGRVYT 68
                    68*********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    
MYASTSSKRP KGRGRRKIEI KKIENQRKRW VAFSKRKKGL LKKAAQLSML SGEEIGVIII  60
SEQGRVYTSE NADCVVERLL LSQNIIKDDD NDDNDDDVDD DMIDDDDMID DDEKDDDNQG  120
GFWWNHPVDF VKINDGKQNL AQINEDGENL QGLMKKEEDR MKKMKSINCL IDLNKAPDEQ  180
FS