PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022717512.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | NAC | ||||||||
Protein Properties | Length: 301aa MW: 34063.8 Da PI: 6.995 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 169.6 | 1e-52 | 11 | 136 | 1 | 129 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhP+deelv++yL +kv+++++ + + vd++k+ePwd+p++++ + kewyf+s+rd+kyatg r+nrat+sgyWkatgkd++vls XP_022717512.1 11 LPPGFRFHPRDEELVCDYLMRKVASTDT--LQLMIVVDLNKCEPWDIPETARVGGKEWYFYSQRDRKYATGLRTNRATASGYWKATGKDRAVLS- 102 79*********************99983..3568899***********9888999***************************************. PP NAM 96 kgelvglkktLvfykgrapkgektdWvmheyrle 129 kg+lvg++ktLvfy+grapkg+ktdWvmhe+rle XP_022717512.1 103 KGTLVGMRKTLVFYQGRAPKGRKTDWVMHEFRLE 136 999****************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence |
MSNISLVEAK LPPGFRFHPR DEELVCDYLM RKVASTDTLQ LMIVVDLNKC EPWDIPETAR 60 VGGKEWYFYS QRDRKYATGL RTNRATASGY WKATGKDRAV LSKGTLVGMR KTLVFYQGRA 120 PKGRKTDWVM HEFRLEGPLS PPKLSTLKED WVLCRVLHKN REITAKQSSM GSCYDDTGSS 180 SLPPLMDSYI IFDQNQPNLD DYDEQVSCFS MLSQNQTNPI FPDITHMEPN APIKTQTAVG 240 QIPMNVACLD SFPCDKNVIK AVLNHLTKLD TYLNVKESPS FGEGSSDQSY LSEVGMPNIW 300 N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G56010.2 | 1e-125 | NAC family protein |