PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022717202.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | TCP | ||||||||
Protein Properties | Length: 444aa MW: 48042.4 Da PI: 6.8889 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 116.8 | 2.8e-36 | 35 | 131 | 2 | 94 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssaseceaesssssasnsss 87 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai+el+++ ++sas+ +++++++++ XP_022717202.1 35 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDELAELppwnpetltATTSASKPNNQEDQNTTT---- 125 79**************************************************************766665554222222221222222211.... PP TCP 88 gkaaksa 94 + +++ XP_022717202.1 126 -ATDNDK 131 .111111 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 444 aa Download sequence |
MGDSHHQAAT SSRLGIRHTE GEIVEVQGGR IVRSTGRKDR HSKVCTAKGP RDRRVRLSAH 60 TAIQFYDVQD RLGYDRPSKA VDWLIKKAKS AIDELAELPP WNPETLTATT SASKPNNQED 120 QNTTTATDND KAYQFHIHHS GDLVENLAVG SGTRRRTATI MGNEVQSLQQ QEMGDNPNNN 180 SGFLPSYLVS DEIADTIKSF FPLGASSETP SSSIQFQNYP PDLLSRTSSQ SQDLRLSLQS 240 FPEPILLHHH RQAATAQAHH SEPVLFSGTS PLTGFDGSSS GWEHHHQHPP EIGRFQRLVA 300 WNSSGGGADT GSGSGVGGGA GGDSGGVGGF LFGTPSPQPL PTAFGQNSQL FSQRGPLQSS 360 NTPLVRASID QPISTTDEHQ HHHHHQHHRQ IPHNIHHQAA LSGIGFTTSG VFSGFRVPAR 420 IQGEEEEHDG IANKLSSASS DSHH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G15030.2 | 8e-97 | TCP family protein |