PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022717201.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

TCP

Protein Properties

Length: 444aa MW: 48042.4 Da PI: 6.8889

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022717201.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	116.8	2.8e-36	35	131	2	94
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.........ssssaseceaesssssasnsss 87 +g+kdrhsk++T++g+RdRRvRlsa++a++f+d+qd+LG+d++sk+++WL+++ak ai+el+++ ++sas+ +++++++++ XP_022717201.1 35 TGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDELAELppwnpetltATTSASKPNNQEDQNTTT---- 125 79**************************************************************766665554222222221222222211.... PP TCP 88 gkaaksa 94 + +++ XP_022717201.1 126 -ATDNDK 131 .111111 PP

Sequence ? help Back to Top
Protein Sequence Length: 444 aa Download sequence
MGDSHHQAAT SSRLGIRHTE GEIVEVQGGR IVRSTGRKDR HSKVCTAKGP RDRRVRLSAH 60 TAIQFYDVQD RLGYDRPSKA VDWLIKKAKS AIDELAELPP WNPETLTATT SASKPNNQED 120 QNTTTATDND KAYQFHIHHS GDLVENLAVG SGTRRRTATI MGNEVQSLQQ QEMGDNPNNN 180 SGFLPSYLVS DEIADTIKSF FPLGASSETP SSSIQFQNYP PDLLSRTSSQ SQDLRLSLQS 240 FPEPILLHHH RQAATAQAHH SEPVLFSGTS PLTGFDGSSS GWEHHHQHPP EIGRFQRLVA 300 WNSSGGGADT GSGSGVGGGA GGDSGGVGGF LFGTPSPQPL PTAFGQNSQL FSQRGPLQSS 360 NTPLVRASID QPISTTDEHQ HHHHHQHHRQ IPHNIHHQAA LSGIGFTTSG VFSGFRVPAR 420 IQGEEEEHDG IANKLSSASS DSHH

Sequence ? help Back to Top

Protein Sequence Length: 444 aa Download sequence

MGDSHHQAAT SSRLGIRHTE GEIVEVQGGR IVRSTGRKDR HSKVCTAKGP RDRRVRLSAH  60
TAIQFYDVQD RLGYDRPSKA VDWLIKKAKS AIDELAELPP WNPETLTATT SASKPNNQED  120
QNTTTATDND KAYQFHIHHS GDLVENLAVG SGTRRRTATI MGNEVQSLQQ QEMGDNPNNN  180
SGFLPSYLVS DEIADTIKSF FPLGASSETP SSSIQFQNYP PDLLSRTSSQ SQDLRLSLQS  240
FPEPILLHHH RQAATAQAHH SEPVLFSGTS PLTGFDGSSS GWEHHHQHPP EIGRFQRLVA  300
WNSSGGGADT GSGSGVGGGA GGDSGGVGGF LFGTPSPQPL PTAFGQNSQL FSQRGPLQSS  360
NTPLVRASID QPISTTDEHQ HHHHHQHHRQ IPHNIHHQAA LSGIGFTTSG VFSGFRVPAR  420
IQGEEEEHDG IANKLSSASS DSHH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G15030.2	8e-97	TCP family protein