PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022716979.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 589aa    MW: 65771 Da    PI: 5.8908
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022716979.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS420.91.1e-1282165851373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cA+a+s++++ + ++l+ + ++ +s  g+p+qRl ay++e+L ar   s+s++y+al++ e +    ++ l+++++++e++P+lkf++
  XP_022716979.1 216 LKQLLIACAKALSENNMDEFDKLILKTRDSVSICGEPIQRLGAYMVEGLVARKEASGSNIYRALRCIEPE---GKDLLSYMHILYEICPYLKFGY 307
                     689******************************************************************9...9********************* PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++aN aI ea  +e+r+HiiDf+i qG+QW++LlqaLa+Rp+g+p +RiTg+++p s+  +   le +++rLa + e++++p+ef+  v     d
  XP_022716979.1 308 MAANGAIAEACRNEDRIHIIDFQIAQGTQWLTLLQALAARPGGAPYVRITGIDDPVSKyaRGGGLEGVERRLAALSEKFNIPVEFHG-VPVFAPD 401
                     *******************************************************99999999************************.6888999 PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     ++ ++L+v+pgEalaVn+ lq h+++desv+++++rd +L++vkslsPkv ++veqe+++n+++Fl rf+e+leyy a+f+s+++++pr+ +eri
  XP_022716979.1 402 ITRDMLDVRPGEALAVNFPLQXHHTPDESVDVNNPRDGLLRMVKSLSPKVATLVEQESNTNTAPFLPRFIETLEYYLAMFESIDETMPRDRKERI 496
                     *********************************************************************************************** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     +vE+++l+r+ivnv+aceg+er+erhe ++kW++rl++aGF+++pls+++++ +++llr ++ + y++ e++g+++lgWkdr+L+s+SaW
  XP_022716979.1 497 NVEQHCLARDIVNVIACEGKERVERHELFGKWKSRLTMAGFRQYPLSSYVNSVIRSLLRCYS-KHYTLVEKDGAMLLGWKDRNLISASAW 585
                     ***********************************************************999.55************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 589 aa     Download sequence    
MDSHPLFGLY GVTGAGLSYS TSCSTVPSFP NKLFSSLKSD IGNSPNSPFS TQFDCDTNTT  60
LSDSQEQHSS TENLSGLSPS CNSSLESNIY FHRLSPSLDC RRESLPLCSG GTSYIQDANS  120
SHKVIYTLQE LETTLMAPDE DEEVTTSSVS CGESSRPQTT DQRSRAWSQE CQASLVLQPQ  180
TSFVSRHRQS TEVAYIEKRH KTIEDLSLQG IPRGNLKQLL IACAKALSEN NMDEFDKLIL  240
KTRDSVSICG EPIQRLGAYM VEGLVARKEA SGSNIYRALR CIEPEGKDLL SYMHILYEIC  300
PYLKFGYMAA NGAIAEACRN EDRIHIIDFQ IAQGTQWLTL LQALAARPGG APYVRITGID  360
DPVSKYARGG GLEGVERRLA ALSEKFNIPV EFHGVPVFAP DITRDMLDVR PGEALAVNFP  420
LQXHHTPDES VDVNNPRDGL LRMVKSLSPK VATLVEQESN TNTAPFLPRF IETLEYYLAM  480
FESIDETMPR DRKERINVEQ HCLARDIVNV IACEGKERVE RHELFGKWKS RLTMAGFRQY  540
PLSSYVNSVI RSLLRCYSKH YTLVEKDGAM LLGWKDRNLI SASAWHCDN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G48150.11e-161GRAS family protein