PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022716360.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 301aa    MW: 33169.9 Da    PI: 7.1203
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022716360.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA51.11.8e-16230266135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg ++  Tp++Rrgp+g++tLCnaCGl+++ kg+
  XP_022716360.1 230 CRHCGISEksTPMMRRGPEGPRTLCNACGLMWANKGT 266
                     *****99999************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 301 aa     Download sequence    
MDGIHRNNGS MHMASDAQHP MHHHVHYEHH HHHIMNGDAM VDGDDHHDPH HHHHRDVDDS  60
VDGEVAEGVE AGDLPSDHPG ALSGNQGPDN GNQLTLSFQG QVYVYDSVPP EKVQAVLLLL  120
GGCEVPPTMP SIPITTQNNR GLPGTPQRFS VPQRLASLLR FREKRKERNF DKKIRYTVRK  180
EVALRMQRNK GQFTSLKPNA DDSASAASSW GPNQSWVADG NGSQNQEIVC RHCGISEKST  240
PMMRRGPEGP RTLCNACGLM WANKGTLKDL SKAAPQTGQS SSLSKDGEKL LHTTCSELQN  300
I
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51600.21e-106GATA family protein