PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022715830.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

HB-other

Protein Properties

Length: 1748aa MW: 197289 Da PI: 5.1437

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022715830.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	59.3	6.4e-19	29	84	2	57
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 kR+ t++qle+Le++++ + yps+++r+ L++klgLt+rq ++WF+ rR kekk XP_022715830.1 29 PKRQMKTPYQLEALEKAYALETYPSEATRAGLSEKLGLTDRQLQMWFCHRRLKEKK 84 69*****************************************************8 PP

Sequence ? help Back to Top
Protein Sequence Length: 1748 aa Download sequence
MEPGSEGETN QIKIPNKNNN NSNEGNIKPK RQMKTPYQLE ALEKAYALET YPSEATRAGL 60 SEKLGLTDRQ LQMWFCHRRL KEKKETPSKT PRKGAALPPE SPIDELRAVP EPDYGSGSGS 120 GSSPYMDSRK LGGSPSRGMM EDVPMVMRYY ESQQSIMELR AIACVEAQLG EPLRDDGPIL 180 GMEFDSLPPD AFGAIPEPDK KSGHPYESKL YERHDGRSSK AAARTFHEYQ FLPEHSSLRS 240 DAYGQVTQSH FHESPADGAR GRATSFVHGE EPLSRVHGIQ GHGSRVRVLP QQDKTGIIPL 300 SSQVADDSLA ERESFTNGRI NAQSISHSVL GSEDPYMLSA GQTFNNDADL RNDRKRKSDE 360 SRIAREVEAH ENRIRKEIEK LDNKRRKSEE RMRKEMERHE RERRKEEERL MREKQREEER 420 SQREQRREME RRQKFLQKEY LRAEKKRQKE ELRREKEEER RRVAREKATA RKIAKESMDL 480 LEDEQLELME LAAASKGIPS IIHLDHDSLQ NLELFRDSLS LFPPKSVQLK RPFTIQPWIE 540 SEENVGNLLM AWRFLITFAD VLRLWPFTLD EFVQGFHDYD SRLLGEIHVA LLKSIIKDIE 600 DVARTPATGL GMNQYCAANP EGGHPQIVEG AYSWGFDIRN WQYHLNPLTW PEIFRQLAIS 660 AGFGPQLKKQ TAGWTYMGDN DEGKGCEDVV STLRNGSAAV NAFAVMREKG LLLPRRSRHR 720 LTPGTVKFAA FHVLSLEGSK GLTVLELADK IQKSGLRDLT TSKTPEASIS VALTRDAKLF 780 ERIAPSTYCV RPAYRKDPTD AEAILAVARK KIRQFENGFL GGEDADEVER DEVERDEVER 840 DEDSECDVDE DPEVDDIATP SIANKDADYP KVEVNICSGS EKVNASTDDA LNVLGEFDKD 900 FPSFPSNTVK DANGPSNTGL YVAGEENGAG SPDQQNIEID ESKSGESWIQ GLSEGEYSYL 960 SVEERLNALV ALIGIANEGN SIRAVLEDRL EAANALKKQM WAEAQLDKSR LKEETIIKMD 1020 FPSVMGIKAE AQLPNSAVEG SQSPFPAADN KNDEASPSIP EDQKPFLCSQ TVQNDVNSYP 1080 AERALVLQEA SMGPDNFSGQ QHGYASKRSR SQLKSYIAHR AEEMYVYRSL PLGQDRRRNR 1140 YWQFVASASK NDPCSGWIFV ELRDGNWRLI DSEEAFDALL ASLDARGIRE SHLRIMLQKI 1200 ESSFKENVRR NLQCARGSGS STENEASEID SSTDFPASFD SPCNASCRLN SDALEILPSF 1260 KIQLGISENG KKSALKRYQD FQRWMWKECY NSSTLCALKY GKKRCVQLLV VCDMCLGSHI 1320 PEEMHCGYCH QTFGSINNSF NFSEHEIQCK ENRKLDTKDT HTLDSSLPLG ISLLKSLFAV 1380 VEVSVPPEAL ESIWTEGHRK IWGRKLHATS STDELLKLLT HLESAIKRDY LSSNFETTRE 1440 LLGSSLQSES DFTDSVLPWI PQTTAAVALR LLELDTCIMY VKQEKVEPAE NREARAFIKL 1500 PSRASLFIKN KELELKELDP DEPMREENFA DLSNTRRNNY KRGRRGREQG SGRKWQRRGS 1560 GFKYDTGKQI ARETNNLSLH LKQQVQRTNG RSSGRGRRTV RKRAERRAAD NTQAARMADV 1620 VKPKASAVSV RDLDEDWRAE KFRMMQMVKP PDSNSVEEGS DDNAQGEGYE QGNWELDFNG 1680 ASSGWNGEPM EASDEDDDAY EDDNGDEQLG EEEDSDGDLE MSDASDEVAK KTRNGDGSDS 1740 AVSEGYSD

Sequence ? help Back to Top

Protein Sequence Length: 1748 aa Download sequence

MEPGSEGETN QIKIPNKNNN NSNEGNIKPK RQMKTPYQLE ALEKAYALET YPSEATRAGL  60
SEKLGLTDRQ LQMWFCHRRL KEKKETPSKT PRKGAALPPE SPIDELRAVP EPDYGSGSGS  120
GSSPYMDSRK LGGSPSRGMM EDVPMVMRYY ESQQSIMELR AIACVEAQLG EPLRDDGPIL  180
GMEFDSLPPD AFGAIPEPDK KSGHPYESKL YERHDGRSSK AAARTFHEYQ FLPEHSSLRS  240
DAYGQVTQSH FHESPADGAR GRATSFVHGE EPLSRVHGIQ GHGSRVRVLP QQDKTGIIPL  300
SSQVADDSLA ERESFTNGRI NAQSISHSVL GSEDPYMLSA GQTFNNDADL RNDRKRKSDE  360
SRIAREVEAH ENRIRKEIEK LDNKRRKSEE RMRKEMERHE RERRKEEERL MREKQREEER  420
SQREQRREME RRQKFLQKEY LRAEKKRQKE ELRREKEEER RRVAREKATA RKIAKESMDL  480
LEDEQLELME LAAASKGIPS IIHLDHDSLQ NLELFRDSLS LFPPKSVQLK RPFTIQPWIE  540
SEENVGNLLM AWRFLITFAD VLRLWPFTLD EFVQGFHDYD SRLLGEIHVA LLKSIIKDIE  600
DVARTPATGL GMNQYCAANP EGGHPQIVEG AYSWGFDIRN WQYHLNPLTW PEIFRQLAIS  660
AGFGPQLKKQ TAGWTYMGDN DEGKGCEDVV STLRNGSAAV NAFAVMREKG LLLPRRSRHR  720
LTPGTVKFAA FHVLSLEGSK GLTVLELADK IQKSGLRDLT TSKTPEASIS VALTRDAKLF  780
ERIAPSTYCV RPAYRKDPTD AEAILAVARK KIRQFENGFL GGEDADEVER DEVERDEVER  840
DEDSECDVDE DPEVDDIATP SIANKDADYP KVEVNICSGS EKVNASTDDA LNVLGEFDKD  900
FPSFPSNTVK DANGPSNTGL YVAGEENGAG SPDQQNIEID ESKSGESWIQ GLSEGEYSYL  960
SVEERLNALV ALIGIANEGN SIRAVLEDRL EAANALKKQM WAEAQLDKSR LKEETIIKMD  1020
FPSVMGIKAE AQLPNSAVEG SQSPFPAADN KNDEASPSIP EDQKPFLCSQ TVQNDVNSYP  1080
AERALVLQEA SMGPDNFSGQ QHGYASKRSR SQLKSYIAHR AEEMYVYRSL PLGQDRRRNR  1140
YWQFVASASK NDPCSGWIFV ELRDGNWRLI DSEEAFDALL ASLDARGIRE SHLRIMLQKI  1200
ESSFKENVRR NLQCARGSGS STENEASEID SSTDFPASFD SPCNASCRLN SDALEILPSF  1260
KIQLGISENG KKSALKRYQD FQRWMWKECY NSSTLCALKY GKKRCVQLLV VCDMCLGSHI  1320
PEEMHCGYCH QTFGSINNSF NFSEHEIQCK ENRKLDTKDT HTLDSSLPLG ISLLKSLFAV  1380
VEVSVPPEAL ESIWTEGHRK IWGRKLHATS STDELLKLLT HLESAIKRDY LSSNFETTRE  1440
LLGSSLQSES DFTDSVLPWI PQTTAAVALR LLELDTCIMY VKQEKVEPAE NREARAFIKL  1500
PSRASLFIKN KELELKELDP DEPMREENFA DLSNTRRNNY KRGRRGREQG SGRKWQRRGS  1560
GFKYDTGKQI ARETNNLSLH LKQQVQRTNG RSSGRGRRTV RKRAERRAAD NTQAARMADV  1620
VKPKASAVSV RDLDEDWRAE KFRMMQMVKP PDSNSVEEGS DDNAQGEGYE QGNWELDFNG  1680
ASSGWNGEPM EASDEDDDAY EDDNGDEQLG EEEDSDGDLE MSDASDEVAK KTRNGDGSDS  1740
AVSEGYSD

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	78	85	RRLKEKKE
2	384	405	KRRKSEERMRKEMERHERERRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G28420.1	0.0	HB-other family protein