PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022715556.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 268aa MW: 30794.7 Da PI: 9.2998 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 12.9 | 0.00034 | 62 | 84 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C k F+++ L H++ H XP_022715556.1 62 YECQFCLKKFTSSQALGGHQNAH 84 99******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 268 aa Download sequence |
MGKERLRLFG FELSFHERHE NCLDGSEEVN DSGKSSEKIL SKMGKTVKEK SVTRKLENKR 60 KYECQFCLKK FTSSQALGGH QNAHKSERQN KRRMQLQPKS TNSSFADPTP QDYSFVGQHC 120 SLPSSNSFSS CAPEFTLFKE FLNNFKSLDQ NQNLYFNMAG FYHSFPLPSN DHFEKGACGR 180 HIVIKPSPSY ISKDSQSLYN RLGLAPPAIH SSSRNCNDKV EKSRSPVYKL SGLDSELHLH 240 MTEVCAYNRS EFVICRYAYK GWKYVMEY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06650.1 | 1e-11 | C2H2 family protein |