PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022715533.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | C2H2 | ||||||||
Protein Properties | Length: 300aa MW: 32538.3 Da PI: 5.362 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.2 | 3.1e-05 | 18 | 39 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C +C+k+F++ L+ H+r H XP_022715533.1 18 SCFYCNKVFNNYRALVGHLRIH 39 6*******************99 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 300 aa Download sequence |
MNFLLAREDA EKHADTKSCF YCNKVFNNYR ALVGHLRIHQ EDKTLRTLNY PGHSSNSMDI 60 TRNPPASPPN CQLNPMAGGN RPTPFTRAPP PFDFSRMFCS NETNQARSKF TGGNPGVAQT 120 QIIMSPDYSY GCGIGATYHH NILASRAFAP AGLNAAISSA AFASSGSVVA TGFSIDSSYL 180 GSNGVCQFNT DEFQISRDGL PLTSGDALQN VQGYNLGPPP CSILDKEGKR PYVADESWNA 240 EIMNVSKKPK IAPNAQVEPE NLEKKELSLF MDADDSIPAS KACFVAEEEG PEDVDLSLRL |