PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022715515.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family TCP
Protein Properties Length: 471aa    MW: 51320.1 Da    PI: 7.9285
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022715515.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP117.41.8e-36862442133
             TCP   2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......................ssssasec 73 
                      g+kdrhsk+ T++g RdRRvRls+++a++f+dLqd+LG+d++sk++eWL+++a  ai el+++                       +++sa+  
  XP_022715515.1  86 SGGKDRHSKVWTSKGSRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAAADAIAELPSLnssfpdrpkqlnnekresggteqGFDSAEVE 180
                     689*************************************************************8888877777777777766666555555333 PP

             TCP  74 eaesssssasnsssgkaaksaakskksqksaasalnlak....esrakarararertrekmrik 133
                      +++ ++ ++n+s++ + +++a+s+ s++s++s l+l++      r kar+rarer ++++ ++
  XP_022715515.1 181 LDGDPHNYQQNQSQHLSLSKSACSSTSETSKNSGLSLSRseirVNRVKARERARERAAKEKEKE 244
                     6666666666666677777777888888888888888775333566999999999776665554 PP

Sequence ? help Back to Top
Protein Sequence    Length: 471 aa     Download sequence    
MEVDDIQTQA FKFSRVGNER NDSSKIGQKG SDNYPDDEED GELIKRSGAN GGGGGGVGGA  60
GADTVGTNPL RGWHHSSRII RVSRASGGKD RHSKVWTSKG SRDRRVRLSV TTAIQFYDLQ  120
DRLGYDQPSK AVEWLIKAAA DAIAELPSLN SSFPDRPKQL NNEKRESGGT EQGFDSAEVE  180
LDGDPHNYQQ NQSQHLSLSK SACSSTSETS KNSGLSLSRS EIRVNRVKAR ERARERAAKE  240
KEKEHESRIA HHQNVNPISQ NSFTELLTSG IGSVSNNNTS PTASAHQNPN AEPDFFHKAN  300
TARQWPVTQM DYFPTGLLGP SSSSRSPHSS GFPGQIQLGN SLPQPISIPP FTVSGENHQE  360
LQHFSFVPNP DHLIPVATTQ PGPGGDYNLN FTISSGLAGF NRGTLQSNSP SFLPHHLQRF  420
SSIDGSSPFY IGTPPMENHH YHQFPAGLDG RLQLCYRDGS KSSDQKGKGK N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.11e-53TCP family protein