PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022715515.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
|
||||||||
Family | TCP | ||||||||
Protein Properties | Length: 471aa MW: 51320.1 Da PI: 7.9285 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 117.4 | 1.8e-36 | 86 | 244 | 2 | 133 |
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt.......................ssssasec 73 g+kdrhsk+ T++g RdRRvRls+++a++f+dLqd+LG+d++sk++eWL+++a ai el+++ +++sa+ XP_022715515.1 86 SGGKDRHSKVWTSKGSRDRRVRLSVTTAIQFYDLQDRLGYDQPSKAVEWLIKAAADAIAELPSLnssfpdrpkqlnnekresggteqGFDSAEVE 180 689*************************************************************8888877777777777766666555555333 PP TCP 74 eaesssssasnsssgkaaksaakskksqksaasalnlak....esrakarararertrekmrik 133 +++ ++ ++n+s++ + +++a+s+ s++s++s l+l++ r kar+rarer ++++ ++ XP_022715515.1 181 LDGDPHNYQQNQSQHLSLSKSACSSTSETSKNSGLSLSRseirVNRVKARERARERAAKEKEKE 244 6666666666666677777777888888888888888775333566999999999776665554 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 471 aa Download sequence |
MEVDDIQTQA FKFSRVGNER NDSSKIGQKG SDNYPDDEED GELIKRSGAN GGGGGGVGGA 60 GADTVGTNPL RGWHHSSRII RVSRASGGKD RHSKVWTSKG SRDRRVRLSV TTAIQFYDLQ 120 DRLGYDQPSK AVEWLIKAAA DAIAELPSLN SSFPDRPKQL NNEKRESGGT EQGFDSAEVE 180 LDGDPHNYQQ NQSQHLSLSK SACSSTSETS KNSGLSLSRS EIRVNRVKAR ERARERAAKE 240 KEKEHESRIA HHQNVNPISQ NSFTELLTSG IGSVSNNNTS PTASAHQNPN AEPDFFHKAN 300 TARQWPVTQM DYFPTGLLGP SSSSRSPHSS GFPGQIQLGN SLPQPISIPP FTVSGENHQE 360 LQHFSFVPNP DHLIPVATTQ PGPGGDYNLN FTISSGLAGF NRGTLQSNSP SFLPHHLQRF 420 SSIDGSSPFY IGTPPMENHH YHQFPAGLDG RLQLCYRDGS KSSDQKGKGK N |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G18390.1 | 1e-53 | TCP family protein |