PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022715325.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family C3H
Protein Properties Length: 623aa    MW: 71219.6 Da    PI: 8.6006
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022715325.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH22.81.6e-07500521426
                     ---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH   4 elCrffartGtCkyGdrCkFaHg 26 
                     +lCr++a+ G C yG++CkF H 
  XP_022715325.1 500 KLCRYHAQ-GRCYYGENCKFLHE 521
                     79**9999.*************5 PP

Sequence ? help Back to Top
Protein Sequence    Length: 623 aa     Download sequence    
MAIYDSESSK DYNEGFEEEI EDCSSFYGSD PYYDSGTDPS YSIEEDTRAK FQKSSIKKKS  60
RPGVARDSDF SIEKDPEERE MDLPEVDDKS YENVQEIIKA GKLEKLKVDE CKVYLRKNGL  120
RLSGKKDLLI QRIKEHLEIL NGGGEKKYPL SSFVLNCKGD ACTGDVVMFE QNVYETFNIA  180
SRSACGPPCG TRIIAGRIVK ESYGAAKQQH TFTIEVLWSR GKKPLPPLYP LLIKGRNLYR  240
LKTLRQRWED EGERQKVLMD KHSRGSLARS NREVRIQEKE RRRMLRADRI LKQEQSKNQS  300
HLSSITTIQP GSSTNSGMLA PQHQHSGLTV LAGKITSQTC GGSLFDLEKL SIMSQRSGVL  360
AESQQLAIQP QQSGLSVAPR EKMIQLSEQS GFCPNFWTKS FQSECQNVHI WNRYQNQIPC  420
DSLKSSGIQE VQLRRGDKLY ESCKQPNHMN IYWNCTSDKS MASGTNKMPE PNYHRQQLKS  480
MNHCHHPATL PQRQGFLSQK LCRYHAQGRC YYGENCKFLH EPREVHGAGE RRCWRIHCQD  540
LSLIACESKT KQESYGPVPM ILYERGEVIN QDKKQRLAAE WGMILWMPTS NSIDLAEVDR  600
SEYGKNKSNL FEVGEMANSK KTI