PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022715323.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C3H | ||||||||
Protein Properties | Length: 623aa MW: 71219.6 Da PI: 8.6006 | ||||||||
Description | C3H family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-CCCH | 22.8 | 1.6e-07 | 500 | 521 | 4 | 26 |
---SGGGGTS--TTTTT-SS-SS CS zf-CCCH 4 elCrffartGtCkyGdrCkFaHg 26 +lCr++a+ G C yG++CkF H XP_022715323.1 500 KLCRYHAQ-GRCYYGENCKFLHE 521 79**9999.*************5 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 623 aa Download sequence |
MAIYDSESSK DYNEGFEEEI EDCSSFYGSD PYYDSGTDPS YSIEEDTRAK FQKSSIKKKS 60 RPGVARDSDF SIEKDPEERE MDLPEVDDKS YENVQEIIKA GKLEKLKVDE CKVYLRKNGL 120 RLSGKKDLLI QRIKEHLEIL NGGGEKKYPL SSFVLNCKGD ACTGDVVMFE QNVYETFNIA 180 SRSACGPPCG TRIIAGRIVK ESYGAAKQQH TFTIEVLWSR GKKPLPPLYP LLIKGRNLYR 240 LKTLRQRWED EGERQKVLMD KHSRGSLARS NREVRIQEKE RRRMLRADRI LKQEQSKNQS 300 HLSSITTIQP GSSTNSGMLA PQHQHSGLTV LAGKITSQTC GGSLFDLEKL SIMSQRSGVL 360 AESQQLAIQP QQSGLSVAPR EKMIQLSEQS GFCPNFWTKS FQSECQNVHI WNRYQNQIPC 420 DSLKSSGIQE VQLRRGDKLY ESCKQPNHMN IYWNCTSDKS MASGTNKMPE PNYHRQQLKS 480 MNHCHHPATL PQRQGFLSQK LCRYHAQGRC YYGENCKFLH EPREVHGAGE RRCWRIHCQD 540 LSLIACESKT KQESYGPVPM ILYERGEVIN QDKKQRLAAE WGMILWMPTS NSIDLAEVDR 600 SEYGKNKSNL FEVGEMANSK KTI |