PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022715151.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 454aa MW: 49801.9 Da PI: 9.4906 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 17.4 | 1.3e-05 | 87 | 109 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022715151.1 87 FVCEICNKGFQRDQNLQLHRRGH 109 89*******************88 PP | |||||||
2 | zf-C2H2 | 12.9 | 0.00033 | 163 | 185 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k++ +s+ k H +t+ XP_022715151.1 163 WKCDKCSKRYAVQSDWKAHSKTC 185 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 454 aa Download sequence |
MKGLLFHQQQ RQVLEENMSN LTSASGEASV SSGNRTEGGT NYPQQYLTTP PPQTQPVKKK 60 RNLPGNPDPD AEVIALSPKT LMATNRFVCE ICNKGFQRDQ NLQLHRRGHN LPWKLKQRTS 120 KEVRKRVYVC PEPSCVHHDP SRALGDLTGI KKHFSRKHGE KKWKCDKCSK RYAVQSDWKA 180 HSKTCGTREY RCDCGTLFSR RDSFITHRAF CDALAEESAR AITGANKLLY PHQPGESAAA 240 SHINLQLPQF NPQDIQPFSL KKEQQSFTTL GPEIPPWLAT QSMLGAGLGP PQSIDLSSSS 300 LIFSPRLDHQ EFTQTHHQDL TLYENTNPNP SLGPSLPPYH PTSVPSPHMS ATALLQKAAQ 360 MGATMSSKTG SSSAPVTAAV ASVMRPHQQS YMSADSAGSN NNTTASFGLN LSSREEVAVG 420 SAFINGLGPF ANRKPPNAGD HASGSGKEGW EFHQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G55110.1 | 1e-123 | C2H2 family protein |