PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022714816.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

C2H2

Protein Properties

Length: 364aa MW: 41995.9 Da PI: 8.6285

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022714816.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.6	0.0002	20	42	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++Cg + s ks+ ++Hi tH XP_022714816.1 20 YVCKYCGICRSKKSLITSHILTH 42 9*********************6 PP
2	zf-C2H2	19.1	3.7e-06	62	83	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg +F+ + +Lk+H+++H XP_022714816.1 62 TCEQCGVTFKKPAHLKQHLQSH 83 6*******************99 PP
3	zf-C2H2	16.2	2.9e-05	89	113	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C dC s++rk++L+rH+ H XP_022714816.1 89 FVCLvdDCRASYRRKDHLNRHLLQH 113 899999***************9887 PP
4	zf-C2H2	15.7	4.2e-05	118	143	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp +C++ Fs + n+krH + H XP_022714816.1 118 FKCPieNCNREFSIQGNMKRHVKEfH 143 89********************9988 PP
5	zf-C2H2	17.3	1.4e-05	158	182	1	23
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ Cgk+F+ s L++H +H XP_022714816.1 158 HVCQevGCGKVFKFASKLRKHEDSH 182 789999***************9888 PP
6	zf-C2H2	12.4	0.00048	248	273	1	23
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kC C +F +ksnLk+H + H XP_022714816.1 248 FKCDfeGCLHTFLTKSNLKQHVKAvH 273 899******************99877 PP

Sequence ? help Back to Top
Protein Sequence Length: 364 aa Download sequence
MDEEKGERAE APIFKDRRRY VCKYCGICRS KKSLITSHIL THHPEEIDDG GKEEEEISSL 60 NTCEQCGVTF KKPAHLKQHL QSHSLERSFV CLVDDCRASY RRKDHLNRHL LQHQGKLFKC 120 PIENCNREFS IQGNMKRHVK EFHDEESTSP DVGSQKQHVC QEVGCGKVFK FASKLRKHED 180 SHVKLDSVEA FCSEPSCMKY FTNEQCLKVH VQSCHQYITC QICGKKQLKK NIKRHLRSHE 240 SGVASERFKC DFEGCLHTFL TKSNLKQHVK AVHEKLKPFA CGFSGCGMRF SYKHVRENHE 300 KSGCHIYVPG NFIESDEQFQ SRPRGGRKRT WPTVETLIRK RVTPPQMDAT MDATMDPGHT 360 LGCS

Sequence ? help Back to Top

Protein Sequence Length: 364 aa Download sequence

MDEEKGERAE APIFKDRRRY VCKYCGICRS KKSLITSHIL THHPEEIDDG GKEEEEISSL  60
NTCEQCGVTF KKPAHLKQHL QSHSLERSFV CLVDDCRASY RRKDHLNRHL LQHQGKLFKC  120
PIENCNREFS IQGNMKRHVK EFHDEESTSP DVGSQKQHVC QEVGCGKVFK FASKLRKHED  180
SHVKLDSVEA FCSEPSCMKY FTNEQCLKVH VQSCHQYITC QICGKKQLKK NIKRHLRSHE  240
SGVASERFKC DFEGCLHTFL TKSNLKQHVK AVHEKLKPFA CGFSGCGMRF SYKHVRENHE  300
KSGCHIYVPG NFIESDEQFQ SRPRGGRKRT WPTVETLIRK RVTPPQMDAT MDATMDPGHT  360
LGCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72050.2	1e-148	C2H2 family protein