PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022714815.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | C2H2 | ||||||||
Protein Properties | Length: 364aa MW: 41995.9 Da PI: 8.6285 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.6 | 0.0002 | 20 | 42 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C++Cg + s ks+ ++Hi tH XP_022714815.1 20 YVCKYCGICRSKKSLITSHILTH 42 9*********************6 PP | |||||||
2 | zf-C2H2 | 19.1 | 3.7e-06 | 62 | 83 | 2 | 23 |
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cg +F+ + +Lk+H+++H XP_022714815.1 62 TCEQCGVTFKKPAHLKQHLQSH 83 6*******************99 PP | |||||||
3 | zf-C2H2 | 16.2 | 2.9e-05 | 89 | 113 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C dC s++rk++L+rH+ H XP_022714815.1 89 FVCLvdDCRASYRRKDHLNRHLLQH 113 899999***************9887 PP | |||||||
4 | zf-C2H2 | 15.7 | 4.2e-05 | 118 | 143 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kCp +C++ Fs + n+krH + H XP_022714815.1 118 FKCPieNCNREFSIQGNMKRHVKEfH 143 89********************9988 PP | |||||||
5 | zf-C2H2 | 17.3 | 1.4e-05 | 158 | 182 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++C+ Cgk+F+ s L++H +H XP_022714815.1 158 HVCQevGCGKVFKFASKLRKHEDSH 182 789999***************9888 PP | |||||||
6 | zf-C2H2 | 12.4 | 0.00048 | 248 | 273 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirt.H 23 +kC C +F +ksnLk+H + H XP_022714815.1 248 FKCDfeGCLHTFLTKSNLKQHVKAvH 273 899******************99877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 364 aa Download sequence |
MDEEKGERAE APIFKDRRRY VCKYCGICRS KKSLITSHIL THHPEEIDDG GKEEEEISSL 60 NTCEQCGVTF KKPAHLKQHL QSHSLERSFV CLVDDCRASY RRKDHLNRHL LQHQGKLFKC 120 PIENCNREFS IQGNMKRHVK EFHDEESTSP DVGSQKQHVC QEVGCGKVFK FASKLRKHED 180 SHVKLDSVEA FCSEPSCMKY FTNEQCLKVH VQSCHQYITC QICGKKQLKK NIKRHLRSHE 240 SGVASERFKC DFEGCLHTFL TKSNLKQHVK AVHEKLKPFA CGFSGCGMRF SYKHVRENHE 300 KSGCHIYVPG NFIESDEQFQ SRPRGGRKRT WPTVETLIRK RVTPPQMDAT MDATMDPGHT 360 LGCS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.2 | 1e-148 | C2H2 family protein |