PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022714813.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
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Family | ARR-B | ||||||||
Protein Properties | Length: 730aa MW: 79531.8 Da PI: 5.0549 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 76.2 | 4.4e-24 | 200 | 252 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 +++Wt+ LH++F+ea++ + G ekA+Pk+ile+m+v+gLt+e+v+SHLQkYR+ XP_022714813.1 200 GKVVWTNSLHNQFLEALRYI-GLEKAVPKKILEHMNVQGLTRENVASHLQKYRI 252 5899****************.********************************6 PP | |||||||
2 | Myb_DNA-binding | 30.2 | 1.1e-09 | 202 | 251 | 2 | 48 |
SSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 WT ++ ++++a + G + +k+I ++m+ +g+t++++ s++qky+ XP_022714813.1 202 VVWTNSLHNQFLEALRYIGLEkaVPKKILEHMNvQGLTRENVASHLQKYR 251 68******************9****************************7 PP | |||||||
3 | Response_reg | 81.8 | 2.1e-27 | 10 | 120 | 1 | 109 |
EEEESSSHHHHHHHHHHHH...HTTCEEEEEESSHHHHHHHHHHHH.ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHH CS Response_reg 1 vlivdDeplvrellrqale...kegyeevaeaddgeealellkekd.pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealk 91 +l+vdD+ + + ++ ++l+ e++ +va+++++ +al +l+++ +Dl+++D+ mp+m+G+el ++i++e k+p+i++++ ++e+ +l+ l XP_022714813.1 10 ILVVDDDSTSLAIISSMLKqwrYEDI-SVATVKTPVDALSTLRAHPsIDLVVTDLHMPEMNGIELQRQINQEF-KVPVIIMSSDDKESVMLKSLA 102 89*****************5544566.788***************99**********************9999.9******************** PP TTESEEEESS--HHHHHH CS Response_reg 92 aGakdflsKpfdpeelvk 109 Ga f++Kp++p++l + XP_022714813.1 103 GGAVFFIVKPVNPDDLKN 120 ***************986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 730 aa Download sequence |
MNSSLLKISI LVVDDDSTSL AIISSMLKQW RYEDISVATV KTPVDALSTL RAHPSIDLVV 60 TDLHMPEMNG IELQRQINQE FKVPVIIMSS DDKESVMLKS LAGGAVFFIV KPVNPDDLKN 120 VWQYTIAAKK GKSVFIEEIG SIEGESSSAG KLSKGQIIIS ESSVNDEKNN TKRRSKRKAS 180 RKDKDDQQEE EEIASSPRKG KVVWTNSLHN QFLEALRYIG LEKAVPKKIL EHMNVQGLTR 240 ENVASHLQKY RIFLKRVAER SCFSSKAFVE SVLKSSIASG HPLLLKTAQE YSRLQELKQM 300 RGLTSQAGYG RSPSAHNAAS LGSILFPNQN ASSSNSAQPQ GYGQYCLLGN QANKRQVSGK 360 TNPLYQGNSL GYANGSNLSL NGGLYGGLIN VPNGSMNGAN SMHTYQQQIQ ARPYFYTADS 420 SSQFRFGSPG LHSSSSTLGT GNIGSISTSY PTLNSSCTNN NTYAGIRLTT DGQLTGMGQT 480 RLNGGYGSMN GTYNQNMNFE AMGNQTFRFN SQGEFSSTVV DGAKQVSPTY TAANQQANTS 540 VLPGLGNLGV SDYNSDHPMN NDSNLDNISL SQQPGDSYPC DVLSESNNYQ FLNEQQVGGD 600 SVQQKPEFAS SSLFPEIYPT LDEIVGSEFL SLEETAPWCE QALGQVQSGN KEFMNTSVGG 660 GEYTSDESYP TNVNQNTNQQ QSGEEHLADS ELSSVFRVDN APTSGDDSSD NQNWGDDFVD 720 SMFGFGPHFE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G07210.1 | 1e-53 | ARR-B family protein |